| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0158 |
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| Symbol | truA |
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| ID | 5326726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus aeolicus Nankai-3 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009635 |
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| Strand | + |
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| Start bp | 177196 |
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| End bp | 178128 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640787553 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001324362 |
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| Protein GI | 150400596 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAATA AAATTAACGA TAATAGTAAT AAGTGTAGTA ATAATATTAA TAACAATTGT
GATAATAAGC TAACCCATTG GGAAAAAGTT GCCAAAAGAA TTAACGAAAA TACATATATT
TTAAAAATAG CCTACGATGG AAATAATGAC GGTTTTCAAA GCCACCCTCA TAAAAAAAAT
AATGTATGTG ATATTATAAT TAATGCACTA TTAAAATGTG GATATATGGA TAAAGAGGAA
ACAAAACCAC TATTGCGAGG GGGTAGAACA GATAATGGAG TATTGGCATT GGGAAATTTT
ATAATTGTAA ATTTAAACCA AGAACCTATA TTGTCCCATG TTTATGCCAA ATTAAAATAT
ACTGGCGTAT GGGTATTAGG ATATAGTAAA ATCTCGGAGC TCCCTGAAAT TAAATATAGG
CATTATAAAT ATATACTACC AAATGAAGGA CAAAATATAA ATTTAATGAT AGAGGGGGCA
AATAAATTAA TCGGAACTCA TTCCTTTCAT AATTTATCAA AAAGAGATAA TACAAAAAAT
AAAAACCCAT TACGGACAAT ATATGATATA AAAATAAAAG AAAATGATTT TTTCATTACT
ATTGATATTT TTGGTAAAAA TTTTTTATGG AATATGGTGA GGCGAATAGT TACAGCACTA
TCGGAAGTAG GAAAAGAAAA TAAGCCTTTA AATTGGATTG ATAAATTACT GGATATAAAC
CATACAGAAG GTGTTGCCCC AGCTCCTGCA AATGGGCTTA TTTTGGTAGA TGTAAAAACA
AATATAAATT ATATACGGGA CGATTATGTA ATTGGAAAAT TTAAAGAAGA ATGGAGAAAG
AATTACAGAA AAAACACAGC AGATGCTGGG GTAAGTATGA ATATGTTAAA TATAGTCAAT
CTTCAAAAAC TGTCCTATGA TAGTCCAAAA TAA
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| Protein sequence | MNNKINDNSN KCSNNINNNC DNKLTHWEKV AKRINENTYI LKIAYDGNND GFQSHPHKKN
NVCDIIINAL LKCGYMDKEE TKPLLRGGRT DNGVLALGNF IIVNLNQEPI LSHVYAKLKY
TGVWVLGYSK ISELPEIKYR HYKYILPNEG QNINLMIEGA NKLIGTHSFH NLSKRDNTKN
KNPLRTIYDI KIKENDFFIT IDIFGKNFLW NMVRRIVTAL SEVGKENKPL NWIDKLLDIN
HTEGVAPAPA NGLILVDVKT NINYIRDDYV IGKFKEEWRK NYRKNTADAG VSMNMLNIVN
LQKLSYDSPK
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