| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0140 |
|---|
| Symbol | |
|---|
| ID | 5326365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 158001 |
|---|
| End bp | 159413 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 24% |
|---|
| IMG OID | 640787535 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001324344 |
|---|
| Protein GI | 150400578 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.207647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTGGG AAGGGTATTT GAAAAAAGGA AATGAATATA AAGATAAGGA AGACTACGAC
AAAGCAATTG AATATTATAA TGAAGCTTTA AAAAATTATC CATACAAATT TAAATGGCGT
ATTTTTATAA ACTTAGGACA TTGTTATTAC TTAAAAAAAG ACTACGACGA AGCAATTAAA
AATTATAAGG AAGCCTCAAA AAACGATTAT CCAGATAAAG AGAAATGGAT TGTTTGTATA
AACTTAGGAC AGTGTTATAA TTCAAAAAAA GAATATGACA AAGCAATTGA ATATTATAAA
AAGGGATTAA GGCTAGGTGG CAAAGAAATT AAAAAATATG GGTACAATAG TGCTATAATT
TCAACATATA TAGAACTTGA AAATATAGAT GATAATGATA AAAGAAATGA ATATTTTGGG
TCATTAGTTA AAATTATGGG GGAAATAGAC AACTTCAAAG AAGAACTTAA AGTAAATAAT
AATAAAGATA ATCCGATTAT TGCACATTAT ACAAAACCAC ATGTTATTAC AGATATGTTA
AAATTAAAAG AAAATAAAGA AGAAAAAGAA AATAAAGAAG ATAAAACGCC TTATTTTAGA
TTGTATGAAG TTTGTTATAT GAATGACCCA GAAGAAGGAA TGACATTAAA AGAAATAATG
GAGAAAGAAG ATGAAATAAC ACAACTATAT AATATATACG AAGATGAGAA TAGTAAAAAG
GATATGAAAA AAGAAAATTA CACATTCTTA GGTAGTTTTA TTGTAGGGGA AGGAGGTAAT
GAAAAAGAAT ATAAAGATAT TGATAAATTA TTTTTATGGA GAACTTATGG AAAAGATGGC
GATAAAGAAG AGGCAAAAGG TATTTGCATC TGTATTAATA AAGAATTCTT TGACCAAAAC
TCCGATAATT TATCAAATTA TCCTATGAAT ATTAATAATA ACGACAATCC GTCTGAAACT
ATTCTTGAAT ATGGGGAAAA TCCTGATGAA TTTTGTTTAT ATAAAGTAAT TTATGAAGAT
ACTAATGAAT TAATTACCGT TTTGAAGAAA ATTGATAAAT ATGCCAAAGA TTTAGATTTA
AAAAACAATA AAATCAAAAA ATTATTAAAT AGATTATTGG ACGAACTTAG ATATTTAGTA
AAATCTAAAC ACTACACAGA AGAAAAAGAA TATAGAATTA TAAAAAGATA TAATATAAAT
AAAGAAATAG ATATAAATGA AATAAATAAA AATAAAATAA AAATAGATTA CGATATATTC
TCCCCAAGAT TATATATTGA AATAGAAAAA GATTTCACAG AATACATCGA TAAAATTGTA
TTGGGTCCAA GACTGGAAAA TAAAGATTCG TGGAAATCAT ATTTAAATTA TAAGGATATA
GATGTTATGG AATCAACATG CCCATTTAAA TAA
|
|---|
| Protein sequence | MNWEGYLKKG NEYKDKEDYD KAIEYYNEAL KNYPYKFKWR IFINLGHCYY LKKDYDEAIK
NYKEASKNDY PDKEKWIVCI NLGQCYNSKK EYDKAIEYYK KGLRLGGKEI KKYGYNSAII
STYIELENID DNDKRNEYFG SLVKIMGEID NFKEELKVNN NKDNPIIAHY TKPHVITDML
KLKENKEEKE NKEDKTPYFR LYEVCYMNDP EEGMTLKEIM EKEDEITQLY NIYEDENSKK
DMKKENYTFL GSFIVGEGGN EKEYKDIDKL FLWRTYGKDG DKEEAKGICI CINKEFFDQN
SDNLSNYPMN INNNDNPSET ILEYGENPDE FCLYKVIYED TNELITVLKK IDKYAKDLDL
KNNKIKKLLN RLLDELRYLV KSKHYTEEKE YRIIKRYNIN KEIDINEINK NKIKIDYDIF
SPRLYIEIEK DFTEYIDKIV LGPRLENKDS WKSYLNYKDI DVMESTCPFK
|
|---|
| |