| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1608 |
|---|
| Symbol | |
|---|
| ID | 5324921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 1626496 |
|---|
| End bp | 1627422 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640787301 |
|---|
| Product | elongation factor Tu domain-containing protein |
|---|
| Protein accession | YP_001324112 |
|---|
| Protein GI | 150400345 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00210817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATG TCGCAATTGG AATTTTTGGT GACTTTGAAG ATGCAGGTAA AAATATTGCA
AAAAAAGGAA CTTCTACGGA TATTACGCTT TATAATTACA AAAATGGCGA TGATTCAGCA
GTATTTATTG AACCTACGAG GTATCCTGAG AGAATTCATC CATTAATATA TGCTATTAAT
ATGATGGACT ACGCTCTAGT ATTTATTGAT GAAATAAAGC CCGAAATTGG GGAAACACTT
TTAACACTTA ATTTATTTGG TGTTGAAAGG GGTTTTTTTG TTGTAGGGGA ATACGTTGAT
ATAAACCAGC TAAAATCTAT TATTTCAAAC ACATCTATGA AAAACTTTGA AATTTTAGAA
AAGGACTACA TAAAAATAAG GGAAAAAATG GTGAAGCTTC CAGAAGTTGA AAAAAGTAGC
GAATACGTAA AAATCCCGAT TGACCATTTT TTTTCGGTAA GAAGCGTTGG AACAGTAATA
TTGGGAAAGG TAGAAAAAGG AAATGTTTCT GTTCATGATA ATTTAAGAAT TTATCCTAAA
ACCGCTAAAG CCATGGTAAA GAGTATTCAA GTCCATGATA GGGATGTTAA AGAAGCTAAA
ACAAATTCAA GAGTCGGTCT TGCATTAAAA GGAATTGATG TTGACGATTT AGAAAGAGGC
CTTGTTCTTT CAAACGGAAA TTTAAGCGTC TCAGATAAAG TTGAACTAGA AATGACTTGG
AATCCGTACA TGACTAAAGA AATTATTTCT GGAGAAGGAT ACCAGATAGT CGTTGGATTA
CAGACGGTAA GCTGTAAAGT CGATTCAAAG AATGGTAACA GATTAAAATT AAGCCTTTTA
AAACCCGTAT GTTATGAATC AGGCGATATA TTTGTGCTAT TGGATGGAAG TGCAAAAGTA
AGAGTTTTGG GTGTTTCTAA GATATAA
|
|---|
| Protein sequence | MTDVAIGIFG DFEDAGKNIA KKGTSTDITL YNYKNGDDSA VFIEPTRYPE RIHPLIYAIN
MMDYALVFID EIKPEIGETL LTLNLFGVER GFFVVGEYVD INQLKSIISN TSMKNFEILE
KDYIKIREKM VKLPEVEKSS EYVKIPIDHF FSVRSVGTVI LGKVEKGNVS VHDNLRIYPK
TAKAMVKSIQ VHDRDVKEAK TNSRVGLALK GIDVDDLERG LVLSNGNLSV SDKVELEMTW
NPYMTKEIIS GEGYQIVVGL QTVSCKVDSK NGNRLKLSLL KPVCYESGDI FVLLDGSAKV
RVLGVSKI
|
|---|
| |