| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1604 |
|---|
| Symbol | |
|---|
| ID | 5324604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 1623063 |
|---|
| End bp | 1624415 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640787297 |
|---|
| Product | MATE efflux family protein |
|---|
| Protein accession | YP_001324108 |
|---|
| Protein GI | 150400341 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG TTTACGATTT AGGACTTGAA AACATTAATA AATTATTGGC TAGGTATTTA
GTTCCATCAG TTCTTGGAAC TACAATAATT GGAATTTACA GCATTATTGA CGGCATTTTT
ATCGGTAGAT ACGTTGGTAC TGACGGCCTT GCAGGAGTAA CACTTGCATT TCCCATTTCT
GTTGCAGTAG GATCTATTGG ACTAATGATT GGTTACGGAG CTTGTGCAAA TATATCCGTT
AAGCTTGGGA AAAGAGATTT TAACGGAGCA AATGCAATAT TAAGTGTTTC TTTAATCTAT
ATTTTAATAT TTGGAACATT TATTACATTT TTTGGTTCAT TACTATTGAA TAATTTAATA
GAAATTATGA ATATTCCAAA AAACCTTGAA TCTTACGTTT TAAATTATTC TAGAGTAATT
ATTTTTGGAA GCCTTGCAAC AATTACTGCA TATTCCCTTG ATGCAATTTT AAGAAATGAT
GGCTTTCCGA AAAAATCCAT GTATATTTTA ATAATAGTGT CAATATCTAA CATTGTTTTA
GATTATATTT TAATTGCAAT ACTTAATTTC GGAGTACTTG GTGCCGCATT TGCAACAATT
ATTGCACAAA CATTAGGTTC TTTGATATAT CTACACCACT TTATATTTGG AACGTCAAAC
CTTGTTTTTC AAAAAAATAA AATACATTTA GAATATATAA CAATAGTAAA AATCTTAAAA
ACAGGTTTTT CGCCGTTTAT AATGGAATTG GCTTTTGGAT TTTTAATGCT TATTCATAAT
ATTCAATTTT TACGTTACGG AAGTTCCATT GACGTTTCTG CATATGGTAT CGTGATATAT
GTTACCTCTT TTTTATATAT GGGATATTTA GGAATATCTG ATGGCATCCA ACCGCTAATT
AGTTATAATT ATGGTGCAAA GAAATTTAAA AGAGTTTTTG AAGTTTTAAA AAAGGCGATA
TTTATAAATT TTTTAATGGG GATAATATCG TTTATTTTAA TTTTAAGGTA TCCAAAAAAA
ATTATACATG TATTTAACCC ATATGATGCA TTATTAGTTA CCCAAACAGT GCATGGTCTT
ATTATTCATA ATTTTTCACT TTTAATCCTT GGAATTTCAA TGATTATAAT ACTGTACTTT
CAAGCAACAG AAAACTCAAA AATTGCAGGT TTTCTCTCAT TAGGGCGAAG CATTTTATTT
ATTATACCAG CTCTGCTTAT TTTTCCAAAG TATCTTGGAG TTAGCGGAAT ATGGCTTTCA
ACGGTATTTT CAGAATACTT ATGTCTTTTA TTTGGGTTAT TTTTTTTCTT TAGAAGTGTT
AAAAAAAATA TCTGGGCAAA AAAAGATATT TAA
|
|---|
| Protein sequence | MKQVYDLGLE NINKLLARYL VPSVLGTTII GIYSIIDGIF IGRYVGTDGL AGVTLAFPIS
VAVGSIGLMI GYGACANISV KLGKRDFNGA NAILSVSLIY ILIFGTFITF FGSLLLNNLI
EIMNIPKNLE SYVLNYSRVI IFGSLATITA YSLDAILRND GFPKKSMYIL IIVSISNIVL
DYILIAILNF GVLGAAFATI IAQTLGSLIY LHHFIFGTSN LVFQKNKIHL EYITIVKILK
TGFSPFIMEL AFGFLMLIHN IQFLRYGSSI DVSAYGIVIY VTSFLYMGYL GISDGIQPLI
SYNYGAKKFK RVFEVLKKAI FINFLMGIIS FILILRYPKK IIHVFNPYDA LLVTQTVHGL
IIHNFSLLIL GISMIIILYF QATENSKIAG FLSLGRSILF IIPALLIFPK YLGVSGIWLS
TVFSEYLCLL FGLFFFFRSV KKNIWAKKDI
|
|---|
| |