| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1573 |
|---|
| Symbol | |
|---|
| ID | 5325540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 1586921 |
|---|
| End bp | 1587580 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640787265 |
|---|
| Product | proteasome endopeptidase complex |
|---|
| Protein accession | YP_001324077 |
|---|
| Protein GI | 150400310 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
|---|
| TIGRFAM ID | [TIGR03634] proteasome endopeptidase complex, archaeal, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.210251 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATCAG GCAGCGAATA CCATAAGGAA TACATGAAAG GAACAACTAC CGTAGGATTA
ATTTGTGAAG ATGGCGTTGT TTTAGCTACT GACAAAAGAG CTACAATGGG TAACCTCATT
GCTGACAAAG AAGCGAAAAA GTTATATAAG ATTGATGACT ACATAGCAAT GACTATAGCT
GGAAGTGTAG GGGATGCCCA ATCACTCATC AGGTTGCTTT CTGCGGAAGC TAAAATATAC
AAGATGAGAA CTGGAAATAA CATGACTCCA CTTTCCTGTA CTACGTTAAC AAGTAATGTC
TTACATGGTA ACAGGCATTA TCCTCTTTTA ACACAATTAA TAATTGGTGG ATACGACCTT
ATCAATGGAC CAAAATTGTT TTCACTCGAC CCTGTTGGAG GCATTAATGA AGAATCTTCA
TTTACGGCCA CAGGTTCAGG TTCACCTACT GCTTACGGAG TACTTGAAGC AGAGTATAAA
TCCGAAATCA ACATTGAAAA AGGCTTACTT ATTGCAGTAA AAGCCCTTAT ATCCGCAATG
CAAAGAGATG CATACTCTGG AAACGGAATT TCGTTAGCAA AGATAGATAA AACTGGAGTA
ACATTATATT CTGATGAAGA AATTGAAAAC TTGGTAAAAA AAGTAACTAA AAAGAAATAA
|
|---|
| Protein sequence | MISGSEYHKE YMKGTTTVGL ICEDGVVLAT DKRATMGNLI ADKEAKKLYK IDDYIAMTIA
GSVGDAQSLI RLLSAEAKIY KMRTGNNMTP LSCTTLTSNV LHGNRHYPLL TQLIIGGYDL
INGPKLFSLD PVGGINEESS FTATGSGSPT AYGVLEAEYK SEINIEKGLL IAVKALISAM
QRDAYSGNGI SLAKIDKTGV TLYSDEEIEN LVKKVTKKK
|
|---|
| |