| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1280 |
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| Symbol | truA |
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| ID | 5324726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | - |
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| Start bp | 1305366 |
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| End bp | 1306163 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640786972 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001323789 |
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| Protein GI | 150400022 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATAT TCAAAATTGC GTATGATGGA CGTTACAGCT TTCAATCCCA ACCCCATAGA
AATACGGTAT GTGATAAGAT TACGGATACA CTTTTAGAGT GCGGTTATTT AAAAGAAGGT
GAAATACCTA TCTCATATGG TGGAAGGACT GATTTAGGGG TATCCGCACT TGGAAACTAT
ATTGTTTACA ATATAACTGA AAAACCAGTG CTTTCAAGAA TTTACTCGAA ATTACATAAA
CACGGAATCT GGATACTGGG TTTTAATGAA CTAAAAGAGC TTCCCGATGT AAAATATCGA
CATTATCGAT ATATTCTCCC AAATACGGGT CAAGACATTG AATTAATGAA AAAGGCATCG
GAAAAATTAA TTGGAACGCA TTCTTTCCAT AATCTATCAA AAAGAGATAA AACTAAGAAC
AGAAGTCCCA TAAGAACGAT TTATAATATT AAAATTGCTA AAAATGAGTA TTTTATAACC
ATTGAAATTT TTGGAAAGAG CTTTTTATGG AACATGGTTC GAAAGATTGT AAGGCTTCTT
TCTAATGTTG GATTAAGCAA ATACAAAGAG TTTGAAAAAT TCATTGATGA TTTATTGGAT
AGGGATGTAA GAATGGGAGT TCAACCTGCA AGTGCAGAAG GTTTAATACT CGTCGATGTT
AAAACGAATA CTGAATTTAA AATTGATGAA TATACGGTTA AAAAATTTGA TCAGTATTTT
AAAAAGTCCC TAAACAACCA TTCCATGAAT ATGGGTCTTT CAAAAACCAT GCTATCCAAA
AATCAGGTGA GTTTATGA
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| Protein sequence | MYIFKIAYDG RYSFQSQPHR NTVCDKITDT LLECGYLKEG EIPISYGGRT DLGVSALGNY
IVYNITEKPV LSRIYSKLHK HGIWILGFNE LKELPDVKYR HYRYILPNTG QDIELMKKAS
EKLIGTHSFH NLSKRDKTKN RSPIRTIYNI KIAKNEYFIT IEIFGKSFLW NMVRKIVRLL
SNVGLSKYKE FEKFIDDLLD RDVRMGVQPA SAEGLILVDV KTNTEFKIDE YTVKKFDQYF
KKSLNNHSMN MGLSKTMLSK NQVSL
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