| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1158 |
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| Symbol | aksA |
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| ID | 5325712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | - |
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| Start bp | 1173465 |
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| End bp | 1174625 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640786842 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_001323668 |
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| Protein GI | 150399901 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTGGA AAGAAGTTTC TCAATATAAT CCTAAATTAG ACTTAAAAGA ATGTTATGTA
TATGATACTA CATTAAGGGA TGGTGAACAG ACTCCTGGAG TTTGTTTTAC GGGTAATCAA
AAGCTTGAAA TTGCTAAAAA ATTAGATGAC CTTGGAATAA AACAAATTGA AGCCGGTTTT
CCAACGGTTT CTGAAAATGA AAGAAAATGT ATTAAATCAA TTTCCTCTGA AGGACTTAAT
GCGGATATTT TGGCGCTATC AAGAGTTTTA AAGGAAGATA TCGATAGGGC GATTGAATGC
GATGTTGATG GAATAATCAC TTTTGTTGCA ACTTCGCCTA TGCACCTAAA ATATAAGCTA
CATAAGTCTT TTGAAGAAGT TGAAGAAATG GGAATGAAAG CTATCGAGTA TGCAAAAGAT
CATGGCCTTT TTGTTGCGTT TTCTGCAGAA GATGCAACAA GAACCTCGAT TGAAAATATC
ATAAAAATTC ATAAAAATGC AGAAGATTAC GGTGCAGATA GGGTCCATAT TGCAGATACA
CTTGGATGTG CAACACCTCA ATCAATGTAC CAAATATGTT CTGAACTGAA TAAAAGCCTG
AAAAAAGCAC ATATTGGAGT TCATTGCCAT AATGATTTTG GATTTGCAGC CATAAATTCA
ATATACGGAC TTATGGGTGG TGCAAAGGCA GTTTCAACTA CTGTTAATGG CATTGGAGAA
AGGGCCGGAA ATGCAGCACT AGAAGAGGTA GTAATGGCTT TAAAAGTACT TTATAATTAC
GATATGGGGC TAAATACTGA ACTTATAATG GAAACTTCAA AGTTAGTTGA AACATATTCA
AAAATCAAGG TTCCAGAAAA TAAGCCTCTT GTTGGCGAAA TGGTATTTTA TCATGAAAGC
GGAATACACG TTGATGCAGT TTTAGAAAAT CCTTTAACCT ATGAGCCGTT TTTACCTGAA
AAAATCGGTC AAAAACGAAA AATTGTGCTT GGAAAACATT CTGGATGCAG AGCCGTTGCA
TATAGATTAA ATGAACTTGG ATTTGAAGCG ACTCGTGATG AACTCTGGGA AATTGTTAAA
AAAACTAAGG AAACGAGAGA ACAAGGAACC GAAATAAGTG ACGAAGTATT TAAAAACATT
GTAACACATA TTTTAAATTA A
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| Protein sequence | MDWKEVSQYN PKLDLKECYV YDTTLRDGEQ TPGVCFTGNQ KLEIAKKLDD LGIKQIEAGF
PTVSENERKC IKSISSEGLN ADILALSRVL KEDIDRAIEC DVDGIITFVA TSPMHLKYKL
HKSFEEVEEM GMKAIEYAKD HGLFVAFSAE DATRTSIENI IKIHKNAEDY GADRVHIADT
LGCATPQSMY QICSELNKSL KKAHIGVHCH NDFGFAAINS IYGLMGGAKA VSTTVNGIGE
RAGNAALEEV VMALKVLYNY DMGLNTELIM ETSKLVETYS KIKVPENKPL VGEMVFYHES
GIHVDAVLEN PLTYEPFLPE KIGQKRKIVL GKHSGCRAVA YRLNELGFEA TRDELWEIVK
KTKETREQGT EISDEVFKNI VTHILN
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