| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_2260 |
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| Symbol | |
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| ID | 5315592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009632 |
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| Strand | - |
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| Start bp | 2363760 |
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| End bp | 2365472 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640780375 |
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| Product | PTS system, lactose-specific IIC subunit |
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| Protein accession | YP_001317375 |
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| Protein GI | 150394700 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00394] phosphotransferase system, lactose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component
[TIGR00853] PTS system, lactose/cellobiose family IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAA AATTGATCGC ACAAATTGAA AAAGGGAAGC CATTTTTCGA GAAATTATCA
CGTAACATAT ATTTAAGAGC CATCCGTGAT GGATTTATTT CTGCAATGCC TGTCATCTTA
TTCTCAAGTA TCTTTCTATT AATTGCATAC GTGCCAAATA TATTTGGTTT TAAATGGGAT
AAAGGCATGG AAGCCATTTT AATGAAACCA TATAACTATA CGATGGGGCT TGTAGCATTT
TTAGTAGCAG GAACGACAGC GAAATCTTTA ACAGATTCAT TTAACCGTAA GCTAGAAAGT
ACAAATCAAA TTAACTTTAT TTCTACAATG CTAGCAGCGA TGTGTGGATT CTTGTTCTTA
GCTTCTGATC CAGCCAAAGA TGGTGGATTC TTAAGTGCAT TTATGGGAAC TAAAGGTTTA
TTAACAGCAT TTTTATCAGC ATTTGTAACT GTTATTGTTT ATAACTTCTG TGTGAAGCGC
AATATTACAA TTAAAATGCC GAAAGAAGTA CCGCCGAATA TTTCACAAGT ATTTAAGGAC
TTAATTCCAT TTTCAGCGGT AATCATCATT CTTTATGCAT TAGATTTAGT CATTCGCAAC
AGCTTTAAAT CAAATGTAGC GGAAGGTATT TTAAAATTAT TCGAACCATT ATTTACAGCA
GCAGATGGAT GGATTGGTGT CACAATTATC TTTGGTGCCT TTGCATTATT CTGGTTTGTA
GGAATTCATG GTCCATCAAT AGTAGAGCCA GCAATTGCAG CCATTACATA TGCGAATATC
GAAGCGAACT TCAAGTTGCT TCAAGCTGGA GAACACGCAG ATAAAATTAT TACATCAGGT
ACACAAATGT TTATCGTTAC TTTTGGAGGT ACGGGTGCAA CATTGGTCGT CCCGTTCATG
TTAATGTGGA TGACGAAATC TAAACGAAAC AAAGCGATTG GACGTGCATC AGTTGTACCA
ACATTCTTTG GTGTAAACGA ACCAATTTTA TTTGGTGCAC CACTAGTATT GAATCCTGTG
TTCTTTATTC CATTTGTATT AGCACCAATT GTTAACGTAT GGATTTTCAA ACTTTTCGTT
GAAGTGTTAG GAATGAATAG TTTTAGTGTA AATTTACCTT GGACAACACC AGGTCCATTG
GGCATTATCA TGGGTACAGG TTTTGGTTTA TGGTCATTCG TACTAGCTAT TACTTTGATT
GTTGTAGATA TTATTATTTA CTACCCATTC CTAAAAGTTT ATGATAGTGA AATTCTTGAT
GAAGAAGAAG GACGTAAAGA AAGTAATTCA GATTTAAAAG AAAAAGTTGC AGCAAACTTT
GATACGAAAA AAGCTGATTC AATTTTAGCG GCAAGTGGTG TATCAGACGA TGCAGCTAAA
GCTTCAAATA TCACAGAACA AACAAATGTC TTAGTACTTT GTGCCGGTGG TGGTACAAGT
GGATTATTAG CCAACGCACT TAATAAAGCA GCTGAAGAAT ATCATGTGCC AGTGAAAGCA
GCAGCTGGCG GATACGGCGC ACATATGGAC ATTATGAAAG AGTACCAATT AATCATTTTA
GCGCCACAAG TTGCGTCTAA CTATGAAGAT ATTAAGCAAG ATACAGATAG ATTAGGTATT
AAATTAGCGA AGACTCAAGG TGCTGAATAT ATCAAATTGA CACGAGACGG CCAAGCAGCC
CTTGATTTCG TTCAACAACA ATTTGAAAAT TAA
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| Protein sequence | MMQKLIAQIE KGKPFFEKLS RNIYLRAIRD GFISAMPVIL FSSIFLLIAY VPNIFGFKWD
KGMEAILMKP YNYTMGLVAF LVAGTTAKSL TDSFNRKLES TNQINFISTM LAAMCGFLFL
ASDPAKDGGF LSAFMGTKGL LTAFLSAFVT VIVYNFCVKR NITIKMPKEV PPNISQVFKD
LIPFSAVIII LYALDLVIRN SFKSNVAEGI LKLFEPLFTA ADGWIGVTII FGAFALFWFV
GIHGPSIVEP AIAAITYANI EANFKLLQAG EHADKIITSG TQMFIVTFGG TGATLVVPFM
LMWMTKSKRN KAIGRASVVP TFFGVNEPIL FGAPLVLNPV FFIPFVLAPI VNVWIFKLFV
EVLGMNSFSV NLPWTTPGPL GIIMGTGFGL WSFVLAITLI VVDIIIYYPF LKVYDSEILD
EEEGRKESNS DLKEKVAANF DTKKADSILA ASGVSDDAAK ASNITEQTNV LVLCAGGGTS
GLLANALNKA AEEYHVPVKA AAGGYGAHMD IMKEYQLIIL APQVASNYED IKQDTDRLGI
KLAKTQGAEY IKLTRDGQAA LDFVQQQFEN
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