Gene SaurJH1_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1472 
Symbol 
ID5317779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand- 
Start bp1511152 
End bp1512138 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content31% 
IMG OID640779556 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001316609 
Protein GI150393934 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000559145 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCATAA TAAAGTCTAT GTTGTATAGA CTGATGCAAA TGATAGTTGT TTTATTTGTT 
ATTTCTACAC TTACATTCAT TTTAATGAAA TTATCACCAG GCAATCCTGT TGATAAAATA 
TTACATCTTG ATGTAGCACA AGTGTCGACG GAACAAATAA ATGCAACCAA AGATAAATTG 
GGATTAAATG ATTCTTTATT GGTACAGTGG TGGCATTGGA TGAATCATTT ATTACATTTT 
AATTTAGGAA AAAGTTTTGA ATCAAAAGAA CCGGTAACAC AGATATTATT CAACTATGCA 
CCCATAACAT TACTCATATC ATTTTCAACA TTAGTAGTGT CGTTATGCAT ATCTATACCG 
CTCGGCATTA TAGCAGCCAA ACGATTTCAT AAGTGGACGG ATAAAGTGAT TAGAGTGATC 
TCAACACTAT CGATTAGTTT ACCAGCGTTC TTTATCGGTA TTATTTTATT ATTTATTGTC 
ACAAATTTAA TGAATATAGA TAGCGTTATA CTAAGTCAGT TTATATTACC TGTAATCACG 
CTATCTTTAG GTATGTGTGC ATACATCATT CGTTTAGTGC GTTCTAATTT ATTGATGTTA 
TTGCAAAGTA ATATCGTACA AGCATCAAGA TTACGCGGTA TGAATGAACG TTATATTTTA 
ATTCATGATT TACTAAAACC AACAATTTTG CCGATTATCC CATTACTAGG GATTTCACTT 
GGCAGTCTAA TAGGTGGTAC TGTAGTGATT GAAAATTTAT TTGATATACC TGGTATTGGT 
TATCTATTAA TGGATAGTAT TAAATCTCGA GATTATCCTG TTATTCAAGG ATGCGTGTTA 
TTTATTGGCT TCTTCGTTGT TATTATCAAT ACGATTGCTG ATTTATTAAC GTTATTACTT 
GATCCGAAGC AGCGTTTACA ATTAGGAAAT CCAAAAAACA AAACCAATAC ACCATTGATA 
TCAGAAAGTA GTGACCGTCA TGCATAA
 
Protein sequence
MFIIKSMLYR LMQMIVVLFV ISTLTFILMK LSPGNPVDKI LHLDVAQVST EQINATKDKL 
GLNDSLLVQW WHWMNHLLHF NLGKSFESKE PVTQILFNYA PITLLISFST LVVSLCISIP 
LGIIAAKRFH KWTDKVIRVI STLSISLPAF FIGIILLFIV TNLMNIDSVI LSQFILPVIT 
LSLGMCAYII RLVRSNLLML LQSNIVQASR LRGMNERYIL IHDLLKPTIL PIIPLLGISL 
GSLIGGTVVI ENLFDIPGIG YLLMDSIKSR DYPVIQGCVL FIGFFVVIIN TIADLLTLLL 
DPKQRLQLGN PKNKTNTPLI SESSDRHA