| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6461 |
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| Symbol | |
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| ID | 5320764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | + |
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| Start bp | 106898 |
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| End bp | 108136 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640778024 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001314956 |
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| Protein GI | 150378362 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.624578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAGT TCTATTTTTC GTACGGTGGG GTGCTCAAGC GCCTTCGTAG TGGTGCGCTC
GGTGGCGAGA TGGATCGCCT CGCGGAGCAT TTTTTCAGAC TTGGTTACAA ACGAGCGTCG
GCCAAGATTT ATCTGAGCCG AATTGCGCGC TTCAGCCGGT TTGCCGGGAC ACGCTGCGGT
CCGATGCCGA TCCATCAAGA TGTCGTCGAT AGCTATTTGC GCACGTTTCC CACGGATACG
CCGCGCATTG GAGCTATGTC GGCGCTAGGA CACGCACGGC GAGTGGCTCC GGAGCGGTTC
ATTATTTCCG TTCCAAGTGA AGAGGATGAT CCGGATGCTC CGCTTCTGGC CTCCTTTTCG
GACTATCTGC GCAGGGTACG GGGCCTGGAG CCGAAGTCCC GCGAAGGCGT TCTTCTGGGC
GGCCGCCGCT TTCTGGATTG GTGCCGCCAT CACCATCCCG GCCAGGACAT CGAGGCGTTG
ACGGCCAAGC AGGTCCTTGC TGCTGTCGAG TATCGGCTGT CGCTATCGAC AACCTCCGGG
AGCCGCACGG CAGCGACTTC TCACATTCGA ACATTTCTTC GGTTTTTATA TTGGGCTGGT
CGCCATCACC AAGATCTCGC CCGCATCGTC CCAAGGACGC CCTCTTGGCG CTTGGCGCAT
TTGCCGCCGC GCCTTGCATG GAATGACGTT CGGCACGCGA TCGATGCAAT CGGCGCAACG
ACGCCGGTCG GCATCCGCGA TCGAGCCGTC CTGCTGCTGC TCGCCACCAC GGGCATTCGC
AACGGCGAGT TACGCGCCAT TCGGCTTCGC GATATCGACT GGCGTACTGG CGAGGTTTTT
GTCCGGCGGA CCAAAGGCAA GCGTGATCGG GTGGTGCCAC TCCTCGAGGA GACCGGCGCC
GCACTCGCCG ATTACATCCT GCGCGCTCGA CCGAGGGTGG ATAGTCCGTA TCTGTTCCTG
TCGTTCACGC CGCCGGTGGG ACCGTTCAAG TGTGCGGCGC CTGTTTCAAG GATCGTGCGG
AAGCGGTTGC GGCATGGCGG GGTCGAACTC GGGCGGGTCG CAGGTGCGCA TCTCCTGCGC
CACAGCCTTG CTACCCAGCT TGTCGGGCAG CGAAGGCCGA TCAACGAGGT CGCCGATCTT
CTTGGCCACC GGAGCATCAA CACAACGGCG CTGTACGTGA AGGTTGCGGC CTCGCAGCTC
GCCGAGGTCG CACTCCCCTT TCCGGGAGGC GTGGCATGA
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| Protein sequence | MLEFYFSYGG VLKRLRSGAL GGEMDRLAEH FFRLGYKRAS AKIYLSRIAR FSRFAGTRCG
PMPIHQDVVD SYLRTFPTDT PRIGAMSALG HARRVAPERF IISVPSEEDD PDAPLLASFS
DYLRRVRGLE PKSREGVLLG GRRFLDWCRH HHPGQDIEAL TAKQVLAAVE YRLSLSTTSG
SRTAATSHIR TFLRFLYWAG RHHQDLARIV PRTPSWRLAH LPPRLAWNDV RHAIDAIGAT
TPVGIRDRAV LLLLATTGIR NGELRAIRLR DIDWRTGEVF VRRTKGKRDR VVPLLEETGA
ALADYILRAR PRVDSPYLFL SFTPPVGPFK CAAPVSRIVR KRLRHGGVEL GRVAGAHLLR
HSLATQLVGQ RRPINEVADL LGHRSINTTA LYVKVAASQL AEVALPFPGG VA
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