Gene Smed_6417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6417 
Symbol 
ID5320720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp74230 
End bp75240 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content55% 
IMG OID640777997 
Producthypothetical protein 
Protein accessionYP_001314929 
Protein GI150378335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATCATA ATTGGCTTGA TCGTTGGGAC GAGCGGCGGG CGCGGCGCGG TGAGGAAGCG 
AAGAAAGTAA CGGATTTCAT CCTCGACGCC GGCCGGGCAT TTCCGGGCGA GAAGAGGATA
GAAACTATCG ACGAGTTTTG TGTCCTTGCG GACCAGGCCT TGTCTGATTC AAGCTTTTAC
GATGAGCCCA GCGGGAGCGG TCAGGGCTTT GAAAGGCACG ATGGGTGGCT CAGATTTCCA
TCGGACATTT CTACTGATGT CGAAGAGAAC AACGTCGTTT GGGCAAAAAT CACCGAGAGC
GGCTCGCTCG ATCAGGCATT GGTGATTTTT CATCACTGGA ATGCCAGCAC CCGAAATCGT
CAGATTGCCA AGTTTTTCTC GCAGCGTGGG ATCACGGTCG TCGAGATTGC TATGCCTTAT
CACTTCGAGC GCAGCCGTCC CGGCTCGCTG TACGCCGATT ATATGCTTAG TTCGAATCTC
GGCCGAACGA TCCAGTCTGT AAGGCAGGCC GTATGGGATG GGCGAAAGCT CATCCGCTGG
CTGAAGAGCG AAGGATATCG AGAGGTCTCG GTTCTCGGCA TGAGCCTTGG CTCCTGGGTT
GCGGGATTGA TCGCTGCACA TGATCCGGCC GTATCGAAGG CCTCGTTATT TTTGACGGCG
GGAAGTCTCG CAGACATGGT TTGGACGGGG CGCGCGACCC GATCGATACG CGATAGCCTT
GAGCCTGTAA TTGAGCTCAC CGATCTCCGA AGGGCATGGG GTCCGCTCAA CTTGGAGAAT
TACGCGCATA ATCTGGCACG GCCCGATCTC GAACTTCACG TCGTGTTGGC TACGAGGGAC
AAGGTGGTGT TGCCCGACCT CTCGAGACGC CTCATTCAGA AGCTGAAGGA CGCCGGAGTG
AGGTCGACTG TTTTGGAACT GATCTGCGGT CACTATTCGC TCGCCATGCC GCCTTACATT
TTACTGGCGG GTTTGAGCTT GAAGCGGTTT CTATCGTGTG CGGACAAATG A
 
Protein sequence
MYHNWLDRWD ERRARRGEEA KKVTDFILDA GRAFPGEKRI ETIDEFCVLA DQALSDSSFY 
DEPSGSGQGF ERHDGWLRFP SDISTDVEEN NVVWAKITES GSLDQALVIF HHWNASTRNR
QIAKFFSQRG ITVVEIAMPY HFERSRPGSL YADYMLSSNL GRTIQSVRQA VWDGRKLIRW
LKSEGYREVS VLGMSLGSWV AGLIAAHDPA VSKASLFLTA GSLADMVWTG RATRSIRDSL
EPVIELTDLR RAWGPLNLEN YAHNLARPDL ELHVVLATRD KVVLPDLSRR LIQKLKDAGV
RSTVLELICG HYSLAMPPYI LLAGLSLKRF LSCADK