| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6355 |
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| Symbol | |
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| ID | 5320658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | + |
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| Start bp | 21564 |
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| End bp | 23471 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777948 |
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| Product | cytochrome c oxidase subunit I type |
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| Protein accession | YP_001314880 |
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| Protein GI | 150378286 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGAGA CGGTTATCAA GGAAGCCCTC GACTCCGACG TGCCGGAGGG CGAACTGCCG
AAGCGGCTCG CCGCCACCTG GGGTACCGAA AGCGGCCTTA TCGGCGCGCT CTCCACCGTC
GACCACAAGA TCATCGGCCG GCGCTATATT TTGACAGGCT TCTTCTTCAT GTTCCTCGGC
GGGCTGGCAG CCGTAGCGAT GCGGCTCCAG CTGGCGTTGC CGGACAATCG GCTGATCGGG
CCGGACCTCT ACAACCAGAT CTTCACGATG CACGGCACGA CGATGATGTT CCTCTTCGGC
GTGCCGATCG GCGAGGCACT CGCAGTCTAT CTCGTGCCGC TGATGGTCGG CACGCGCAAC
ATCGCCTTTC CGAGGCTTAA TGCCTTCTCC TACTACGTCT ATCTGTTCGG CGGACTGATG
ATATGGGTCG CCTTCGCCCT GAACATCGGT CCCGACAACG GCTGGTTCTC CTACGTCCCG
CTCGCCGGAC CGGAATTCTC CCCGGGCAAA CGCGCCGATT TCTGGGCGCA GATGGTGACG
TTCACAGAAG TGGCAGCGCT TGCGGTCGCC GTCGAGATCG TCGTCACCGT ATTGAAGCTG
CGCGCGCCGG GCATGACGCT AGACCGGATT CCGCTATTCG TGTGGGCGAT GTTCGTCAAC
GCCTTCCTCA TCATATTCGC GATGCCCGCC GTGATGCTTG GCTCAACCCT GCTCATCCTC
GACCGTCTGC TCGACACACA CTTCTTCAAC CAGGCCGAGG GGGGCGACCC GCTGCTCTGG
CAGCACCTTT TCTGGTTCTT CGGCCATCCG GAGGTTTACA TCATCTTCCT GCCGGGCACA
GCCTTCGTCT CGGCCATTGT CGCGACCTTC GCCCGCCGCC CGGTTTTCGG TTATCCGGCA
ATTGTGCTTT CGCTGATCGC GACCGGCTTT CTCTCCTTCG GCCTTTGGAT CCACCACATG
TTCACAACCG GCCTGCCGCA GCTCGGTGCG ACCTTCTTCA CCGCCTCCAG CATGATGATC
GCCATCCCCA CGGGCATCCA GATCTTCTGT TGGATCGCGA CCTTATGGGA TGGCAAGCCT
GTCTATCGTA CGCCGCTTCT CTTCGTCCTC GGCTTCTTCT TCATCTTCGT GGCGGGAGGT
CTGTCCGGCA TTATGCTTGC CTCGGTACCG ATCGATACCC AGGTTCACGA CACCTATTTC
GTCGTGGCCC ATTTTCACTA CGTCCTCATC GGCGGCGCCG TCTTCCCGCT CATCGGCGCC
ATCTACTATT GGTTCCCCAA GTTCACCGGG CGCATGATGA GCGAGGGGCT CGGCCGCTGG
CATTTCTGGC TGGCTTTCAT AGGCTTCAAT GTCGCATTCT TTCCGATGCA CATTTCCGGT
CTCAGGGGCA TGCCTCGCCG CGTCTATACC TATCCGGCGG AAATGGGGTG GGATACCCTC
AATCTGGTCT CGACCCTGGG AGCGACGCTC TTCGTCGTAA GCTTCCTCGT CTTCCTTTAC
AACGTGGCCG CCAGCGCCCG CGGCGGCCAC GTTGCGGGTG ACAACCCGTG GGATGCCTCG
ACGCTCGAAT GGGCCACCGC TTCACCGCCG CCGCCGCACA ATTTCCACCG CATCCCCTTC
GTAACAAGCC GCGAGCCGCT CTGGGCTGAG CGCGAGACAC TGCCCGTCGT GACGGGGCTT
GCCGTGGACA AGCGGGAAGT GGTCATCACC ACCACGACCG AGGCACTCCC CGACCTGAAG
GAGAGCTCAC CGGACCCGAC CATTTGGCCA TTTGTTTCCG CGATCGTGGT GGGCGTCATC
TTCATCGCCA GTATCTTCAC GCCCTTGGCA GTCGCCTGGG GAGCCCCCGT AGCCGCCCTG
GTCATACTTG CCTGGTTCTG GCCGAAGAGC ATGGAGGAGG ACAGGTAG
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| Protein sequence | MTETVIKEAL DSDVPEGELP KRLAATWGTE SGLIGALSTV DHKIIGRRYI LTGFFFMFLG
GLAAVAMRLQ LALPDNRLIG PDLYNQIFTM HGTTMMFLFG VPIGEALAVY LVPLMVGTRN
IAFPRLNAFS YYVYLFGGLM IWVAFALNIG PDNGWFSYVP LAGPEFSPGK RADFWAQMVT
FTEVAALAVA VEIVVTVLKL RAPGMTLDRI PLFVWAMFVN AFLIIFAMPA VMLGSTLLIL
DRLLDTHFFN QAEGGDPLLW QHLFWFFGHP EVYIIFLPGT AFVSAIVATF ARRPVFGYPA
IVLSLIATGF LSFGLWIHHM FTTGLPQLGA TFFTASSMMI AIPTGIQIFC WIATLWDGKP
VYRTPLLFVL GFFFIFVAGG LSGIMLASVP IDTQVHDTYF VVAHFHYVLI GGAVFPLIGA
IYYWFPKFTG RMMSEGLGRW HFWLAFIGFN VAFFPMHISG LRGMPRRVYT YPAEMGWDTL
NLVSTLGATL FVVSFLVFLY NVAASARGGH VAGDNPWDAS TLEWATASPP PPHNFHRIPF
VTSREPLWAE RETLPVVTGL AVDKREVVIT TTTEALPDLK ESSPDPTIWP FVSAIVVGVI
FIASIFTPLA VAWGAPVAAL VILAWFWPKS MEEDR
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