| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6332 |
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| Symbol | |
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| ID | 5320635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | + |
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| Start bp | 1637 |
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| End bp | 2701 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640777928 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001314860 |
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| Protein GI | 150378266 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.171538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.121489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATAA AGTCCGATGC AGTTTTTCGG TTTTGCTTTC TCATCGCTTT CATGATCGCT
TGCCAATCCT CGGCCCAAGA AGATACTCAG GAAACGGCTG CTCAGCCGAG TCAATCAGTA
TGCCAAGAGA TAGTTGCACC GGCGGAATTC GAGATGGCGT CTACAACCAT CCGTGGTCTC
AATCCGGGCA ACGATGGGAT AAAGCCACAC GGGTTTGTTC GCCCTTCTGC CGAACAACCG
GTCATCCATG GGATTGATGT ATCGAAGTAT CAAGATGAAG CTGACTTTAG CTCTGTTCGA
GATTGTGGAG GGAGGTTTGC CTATGTCCGC CTATCTGGAG GAACTGACCC CAACAACGAG
CTATTGTACC GGACACATTG GGCAAATGCC CGTGCGTCGG GCTTGGTTCC CGGTCCCTAC
CACAATTTCT CCGTCGTGCC ACAACTCTTG AAGGCCGTGG CAGAAACGGC CGTTCCGAAA
CGCCCGCAAC TCCTAGAATC AATAGCTTCA CAGGCAAATG AGTCAGCTGC TCGCCAAGCT
GACCTTTTTG CGGAGCGGCT CACCGAGGTT TTGCAGTTGG ACCCGGAGGC GGATAGAGAC
TTTCTCCCTA TCGCGGTCGA TCTGACAGCG CGGCCGCTTG CCGACGACGT GGGCGGTCAC
CTCGCTGTGA AAGACCTTTA CGGCAATATG GTTTGCGAAT TCATTCGGTC GATCTCAAAG
ACGAAATTTG CCACGTCTCC CTTGGTAATT TTCAGCGAGA ATGACACATT AACGCATTAT
GGCTTGGTCG AAAAAATCGA ACAGTGTTCT AGGCAAAAGG TTTTGTACTG GATCCGTTTT
AGAGTATCAA ATGGAACTCC ATTCTTTGAG AACAACAAAG ATGGAATGTT TGATAATATA
TGTAGCCCTA GAGAAGGCGA GATCAATAGT AAATTTGGGC GATGTCTGAT CGAACAATAC
ACGTCGTACG GTGGATTTGC GATCTTTAAG GATGGGTCTC CACTTGATTT GGATCGAATT
TTCGCAACTG AAACAGAGTT CCGCCAACTC TTGCAAAAAG GTTGA
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| Protein sequence | MNIKSDAVFR FCFLIAFMIA CQSSAQEDTQ ETAAQPSQSV CQEIVAPAEF EMASTTIRGL
NPGNDGIKPH GFVRPSAEQP VIHGIDVSKY QDEADFSSVR DCGGRFAYVR LSGGTDPNNE
LLYRTHWANA RASGLVPGPY HNFSVVPQLL KAVAETAVPK RPQLLESIAS QANESAARQA
DLFAERLTEV LQLDPEADRD FLPIAVDLTA RPLADDVGGH LAVKDLYGNM VCEFIRSISK
TKFATSPLVI FSENDTLTHY GLVEKIEQCS RQKVLYWIRF RVSNGTPFFE NNKDGMFDNI
CSPREGEINS KFGRCLIEQY TSYGGFAIFK DGSPLDLDRI FATETEFRQL LQKG
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