Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6317 |
Symbol | |
ID | 5320619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1232158 |
End bp | 1233588 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777915 |
Product | hypothetical protein |
Protein accession | YP_001314847 |
Protein GI | 150378252 |
COG category | [S] Function unknown |
COG ID | [COG5276] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.844031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGG CACCCCTTAT AGGCGCGACC GCTGTCGCGG CTTCACAATC CGGTCTCCTC TGCGAGGCCA TCGCGCAGCC ACAGCGGTCG CACTCACCAG CTCCCGCGGG AGCCTTTGCG CACAATGTGG AAGCGGTCGG CTACACCGAC ATGGAACATC GTCCAGCCTT CAAGATGGCG ATACGCGAGG TGAAGGGCCG GTGGTATCTC TACACGGGGC ACTTCTGGGA TGCAGGTTGG AGCATCGTCG ATGTGACCGA TCCTGCCAAG CCGCGGGTTG CCAAGTTTGT TGCTTATCCC ACGCCCAATA CGTGGACGCT GCAGGTTGAT CTGTCGGGCG ACACGATGGT GACCGCTCTG GAAAAGCCGT TCGCCAACTT CGGCGGGAAT CCAAATGCTC CTTTCGACGA AGGACTTCTC ATTTGGGACA TTGCAGACCC GCTCAGCCCG CAACTGTTGT CGCATTTCAA GACCGGTGCA AACGGCACCC ATCGCAACTT ATATCCGGGA GGTCGCTATG TGCATGTAGC GGCGTCCATG CCGGGTTATC GCGGCAACAT CTATCTCATC CTCGATATTT CAGACCGTGC CAATCCACGT GAAGCGGGAC GCTGGTGGGT GCCGGGGCAG CACGAGGCCG GCGGCGAGAG TTTCTTCGAT GCTCTGCCAA CGAATGCCTC ACATTCGAGG AGACGAGCGG AACCGATGCG TTTTCAAGCG CAATGCATGT GCGGCGCGTT CTGCTCCGGC GCCGGCGAGG ACGTCTCACT GCATGGGCCG GCCTATGTCA CGGGAAACCA CGTATATCTG CCCTACGGCG CAGCTGGCAT GATCGTGCTC GACATAAGCG ATGTATCGCA GCCGCGGCAG ATCGGCGGGC TGAGCTTTAG TCCCCCGTTT CATTCCCGCT TCGGCGTGCA CGGCGTTCTG CCGGTGCCCG ACCAGGGCAT CGCATTCGCG AACTCGGAAG ACGTCACTTA CGGGCAGGGC GCCGCGCATC ATGCATCGAT CGTCGACATA TCGGATCCCA GCGCGCCCTT CCTGCTTTCG CTGTTCCCGG AACCTGTTCC GCCGGCGGCG GCTCCTTACT CCGACTTCAC GACACGAGGC GGATGGCGGG GCCCACACAA CATCAACCAT CATCAGCATC ATCCAGATGT CGAGAAACAG GGCGACCTCT TCTACATCGC CCATTTCAAT GCGGGACTGC GCATCTACGA CGTATCCAAC AGGCGGCTCC TGCGCGAAGT CGGCTATTTC ATCCCGCCGG AGCCGACACG GCGTTACGGG CCAATGCCAG AGGACAAGTT AGTTCTTCAG ACCGAAGATG TCGTGGTCGA TCGTCGTGGC TTCATCTACA TCAGCGATAA GAATCAAGGC ATCTGGATCC TGCGCTACAC CGGTGAACGG CCGCAGGCGC GCCGCGCATG A
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Protein sequence | MLKAPLIGAT AVAASQSGLL CEAIAQPQRS HSPAPAGAFA HNVEAVGYTD MEHRPAFKMA IREVKGRWYL YTGHFWDAGW SIVDVTDPAK PRVAKFVAYP TPNTWTLQVD LSGDTMVTAL EKPFANFGGN PNAPFDEGLL IWDIADPLSP QLLSHFKTGA NGTHRNLYPG GRYVHVAASM PGYRGNIYLI LDISDRANPR EAGRWWVPGQ HEAGGESFFD ALPTNASHSR RRAEPMRFQA QCMCGAFCSG AGEDVSLHGP AYVTGNHVYL PYGAAGMIVL DISDVSQPRQ IGGLSFSPPF HSRFGVHGVL PVPDQGIAFA NSEDVTYGQG AAHHASIVDI SDPSAPFLLS LFPEPVPPAA APYSDFTTRG GWRGPHNINH HQHHPDVEKQ GDLFYIAHFN AGLRIYDVSN RRLLREVGYF IPPEPTRRYG PMPEDKLVLQ TEDVVVDRRG FIYISDKNQG IWILRYTGER PQARRA
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