Gene Smed_6317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6317 
Symbol 
ID5320619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1232158 
End bp1233588 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content60% 
IMG OID640777915 
Producthypothetical protein 
Protein accessionYP_001314847 
Protein GI150378252 
COG category[S] Function unknown 
COG ID[COG5276] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.844031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGG CACCCCTTAT AGGCGCGACC GCTGTCGCGG CTTCACAATC CGGTCTCCTC 
TGCGAGGCCA TCGCGCAGCC ACAGCGGTCG CACTCACCAG CTCCCGCGGG AGCCTTTGCG
CACAATGTGG AAGCGGTCGG CTACACCGAC ATGGAACATC GTCCAGCCTT CAAGATGGCG
ATACGCGAGG TGAAGGGCCG GTGGTATCTC TACACGGGGC ACTTCTGGGA TGCAGGTTGG
AGCATCGTCG ATGTGACCGA TCCTGCCAAG CCGCGGGTTG CCAAGTTTGT TGCTTATCCC
ACGCCCAATA CGTGGACGCT GCAGGTTGAT CTGTCGGGCG ACACGATGGT GACCGCTCTG
GAAAAGCCGT TCGCCAACTT CGGCGGGAAT CCAAATGCTC CTTTCGACGA AGGACTTCTC
ATTTGGGACA TTGCAGACCC GCTCAGCCCG CAACTGTTGT CGCATTTCAA GACCGGTGCA
AACGGCACCC ATCGCAACTT ATATCCGGGA GGTCGCTATG TGCATGTAGC GGCGTCCATG
CCGGGTTATC GCGGCAACAT CTATCTCATC CTCGATATTT CAGACCGTGC CAATCCACGT
GAAGCGGGAC GCTGGTGGGT GCCGGGGCAG CACGAGGCCG GCGGCGAGAG TTTCTTCGAT
GCTCTGCCAA CGAATGCCTC ACATTCGAGG AGACGAGCGG AACCGATGCG TTTTCAAGCG
CAATGCATGT GCGGCGCGTT CTGCTCCGGC GCCGGCGAGG ACGTCTCACT GCATGGGCCG
GCCTATGTCA CGGGAAACCA CGTATATCTG CCCTACGGCG CAGCTGGCAT GATCGTGCTC
GACATAAGCG ATGTATCGCA GCCGCGGCAG ATCGGCGGGC TGAGCTTTAG TCCCCCGTTT
CATTCCCGCT TCGGCGTGCA CGGCGTTCTG CCGGTGCCCG ACCAGGGCAT CGCATTCGCG
AACTCGGAAG ACGTCACTTA CGGGCAGGGC GCCGCGCATC ATGCATCGAT CGTCGACATA
TCGGATCCCA GCGCGCCCTT CCTGCTTTCG CTGTTCCCGG AACCTGTTCC GCCGGCGGCG
GCTCCTTACT CCGACTTCAC GACACGAGGC GGATGGCGGG GCCCACACAA CATCAACCAT
CATCAGCATC ATCCAGATGT CGAGAAACAG GGCGACCTCT TCTACATCGC CCATTTCAAT
GCGGGACTGC GCATCTACGA CGTATCCAAC AGGCGGCTCC TGCGCGAAGT CGGCTATTTC
ATCCCGCCGG AGCCGACACG GCGTTACGGG CCAATGCCAG AGGACAAGTT AGTTCTTCAG
ACCGAAGATG TCGTGGTCGA TCGTCGTGGC TTCATCTACA TCAGCGATAA GAATCAAGGC
ATCTGGATCC TGCGCTACAC CGGTGAACGG CCGCAGGCGC GCCGCGCATG A
 
Protein sequence
MLKAPLIGAT AVAASQSGLL CEAIAQPQRS HSPAPAGAFA HNVEAVGYTD MEHRPAFKMA 
IREVKGRWYL YTGHFWDAGW SIVDVTDPAK PRVAKFVAYP TPNTWTLQVD LSGDTMVTAL
EKPFANFGGN PNAPFDEGLL IWDIADPLSP QLLSHFKTGA NGTHRNLYPG GRYVHVAASM
PGYRGNIYLI LDISDRANPR EAGRWWVPGQ HEAGGESFFD ALPTNASHSR RRAEPMRFQA
QCMCGAFCSG AGEDVSLHGP AYVTGNHVYL PYGAAGMIVL DISDVSQPRQ IGGLSFSPPF
HSRFGVHGVL PVPDQGIAFA NSEDVTYGQG AAHHASIVDI SDPSAPFLLS LFPEPVPPAA
APYSDFTTRG GWRGPHNINH HQHHPDVEKQ GDLFYIAHFN AGLRIYDVSN RRLLREVGYF
IPPEPTRRYG PMPEDKLVLQ TEDVVVDRRG FIYISDKNQG IWILRYTGER PQARRA