| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6314 |
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| Symbol | |
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| ID | 5320616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1228678 |
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| End bp | 1229811 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777912 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001314844 |
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| Protein GI | 150378249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTTG TTGCTGCCGA TGTCCGTCGG GCCGGATCCA TCGATCAGGT CGCTGTTTCC
GTCAAGGATG TCGGCATGGC TTTCGGCGAT GTTCATGCTG TCAGGAACGC CTCCTTCGAC
CTGCCGCAGG GGCGGTTCCT GACCATTCTC GGCCCGTCCG GTTCCGGCAA GACGACTCTC
CTGCGCATGA TCGCCGGCTT CGACCGGCCG ACCAGCGGAG AGATCTTCAT CAATGGCCAG
CCGGTCAGCG CCGTGCCGCC GCACAAGCGC GCCATCGGTA TGGTGTTTCA GAAGCTCGCG
CTTTTTCCGC ATATGACGGC GGCCGAAAAC GTCGCCTTTC CGCTCAAGAT GCGCCGCCAT
GACGCGCGCA CGATCCCGGA AAAGGTCGAG CGCTATCTCG ATCTCGTGCG CCTTGGCGGC
TACGGAGACC GACGGATCAA TGAGTTGTCG GGCGGCCAGC AGCAGCGTGT CGCCATCGCC
AGGGCGCTGG TGTTCGAGCC CGATCTGCTG CTGCTCGACG AACCGCTTGC CGCGCTGGAT
CGCAAGCTGC GCGAGGAGAT GCAGCTCGAG TTCCGCCGCA TCCAGAAAGA GCTCGGCGTC
ACCACGATCA ACGTCACCCA CGATCAGCGA GAAGCGCTGG TGGTTTCCGA CGAGATCATC
GTCATGAATG GCGGAGCCAT CCAGCAGAAA GCCCGGCCGG TCGACGCCTA TCGCGCGCCG
TCAAACGCCT TCGTAGCCAA TTTCATAGGC GTGACCAATT TTCTCGAAGG AAGGATCGTC
GAACTTACGT CGACGCAGGC CGTGTTTGAA ACAAACGGTG TACGTCTCGT CGGCATCGCT
GCCGATGCCG CCCTTGTGGC AGGCCTATCC TGCAGCGGAG CCCTTCGTGC GGAACAGATA
CGCATTGCGC CCAGGGGCGG GCGGCTCGAT GAGCTCGAAA CGGTGGTGGA CGGCCAGGTG
GTCGATTGCA TTTTCGAAGG CGATCGAGTC GTCTACGAGA TCCGCGTTCC GGATCTGGCA
GGCGTACTGA TGCGCGTCTT CGATCACGAT CCGGAATCCC ACTTGCAGTT CGGTCCGGGC
GACGAGGTTC GTCTCGGCTG GAATGCAAGG GATATGCATG TCTTTCAGAA GTGA
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| Protein sequence | MGVVAADVRR AGSIDQVAVS VKDVGMAFGD VHAVRNASFD LPQGRFLTIL GPSGSGKTTL
LRMIAGFDRP TSGEIFINGQ PVSAVPPHKR AIGMVFQKLA LFPHMTAAEN VAFPLKMRRH
DARTIPEKVE RYLDLVRLGG YGDRRINELS GGQQQRVAIA RALVFEPDLL LLDEPLAALD
RKLREEMQLE FRRIQKELGV TTINVTHDQR EALVVSDEII VMNGGAIQQK ARPVDAYRAP
SNAFVANFIG VTNFLEGRIV ELTSTQAVFE TNGVRLVGIA ADAALVAGLS CSGALRAEQI
RIAPRGGRLD ELETVVDGQV VDCIFEGDRV VYEIRVPDLA GVLMRVFDHD PESHLQFGPG
DEVRLGWNAR DMHVFQK
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