| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6278 |
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| Symbol | |
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| ID | 5320580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1196837 |
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| End bp | 1197967 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777877 |
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| Product | nitrite reductase, copper-containing |
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| Protein accession | YP_001314809 |
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| Protein GI | 150378214 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.518326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.19336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGC AATTCCAGAT GACACGGCGC AGCATGCTGG CAGGCGCCGC GATCGCAGGT
GCCGTGACGC CGCTGATCGG CGCTGTGGCT GCGCATGCGG AAGAAGCGGT CGGCCAGATC
ACCCACGTCG ACGTCGCATC GCTGCCCCGT GTCAAGATTG ACCTGGTGAA ACCGCCCTTC
GTCCACGCGC ATACGCAGAA GGCGGAAGGC GGCCCGAAGG TCGTCGAGTT CACGCTGACG
ATTGAGGAGA AGAAGATCGT CATCGACGAG CGAGGTACGG AGCTCCATGC CATGACCTTC
AACGGCTCGG TACCCGGTCC GCTGATGGTC GTGCACCAGG ACGACTATGT CGAGTTGACG
CTGATCAATC CGGATACGAA CACGCTGCAG CACAATATCG ACTTCCACTC GGCGACCGGC
GCCCTGGGGG GCGGCGCGCT GACGGTCGTC AATCCGGGCG ATACCACGGT GCTGCGCTTC
AAGGCGACCA AGGCGGGCGT CTTCGTCTAC CACTGCGCAC CTCCCGGCAT GGTTCCGTGG
CACGTCACTT CCGGGATGAA CGGCGCGATT ATGGTGCTGC CGCGCGAAGG ACTGACCGAC
GGCAAAGGCA AGCCAATCAC CTATGACAAG GTCTACTATG TCGGCGAGCA GGACTTCTAT
GTGCCGCGCG ACGCAAACGG CAACTTCAAG AAGTATGAAA GCGCCGGGGA TGCTTATGCC
GACACGCTCG AAGTGATGCG CACGCTGACC CCGACCCACA TCGTCTTCAA CGGCGCAGTG
GGGGCGCTCA CCGGCGACAA CGCACTCAAG GCGACTGTCG GCGAAAAGGT GCTGATCGTC
CACTCTCAGG CAAACCGCGA CACCCGCCCG CATCTGATCG GCGGTCATGG CGATTATGTC
TGGGCTACCG GTAAATTCCG CAACCCTCCG GACGTCGATC AGGAGACCTG GTTCATACCC
GGCGGCACGG CGGGCGCTGC CTTTTACACC TTCGAGCAGC CCGGAATCTA TGCCTACGTC
AACCACAACC TTATCGAGGC GTTCGAGCTT GGCGCCGCCG CCCATTTCGC CGTCACCGGC
GAGTGGAACG ATGACTTGAT GACCTCAGTT CGTGCTCCTT CGGGCACCTG A
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| Protein sequence | MSEQFQMTRR SMLAGAAIAG AVTPLIGAVA AHAEEAVGQI THVDVASLPR VKIDLVKPPF
VHAHTQKAEG GPKVVEFTLT IEEKKIVIDE RGTELHAMTF NGSVPGPLMV VHQDDYVELT
LINPDTNTLQ HNIDFHSATG ALGGGALTVV NPGDTTVLRF KATKAGVFVY HCAPPGMVPW
HVTSGMNGAI MVLPREGLTD GKGKPITYDK VYYVGEQDFY VPRDANGNFK KYESAGDAYA
DTLEVMRTLT PTHIVFNGAV GALTGDNALK ATVGEKVLIV HSQANRDTRP HLIGGHGDYV
WATGKFRNPP DVDQETWFIP GGTAGAAFYT FEQPGIYAYV NHNLIEAFEL GAAAHFAVTG
EWNDDLMTSV RAPSGT
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