| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6272 |
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| Symbol | |
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| ID | 5320574 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1190610 |
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| End bp | 1191525 |
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| Gene Length | 916 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777871 |
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| Product | transposase IS111A/IS1328/IS1533 |
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| Protein accession | YP_001314803 |
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| Protein GI | 150378208 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.407349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAAGG ATACCATCGG CGACGATATC TCGAAAGACC AGCTCGACGC TCACCGGATG
AGCAACGGCG CGAAGCGTCG CTTTACCAAC GACACAGTCG GCCACAGAGC TTTCAGGGTT
GGCTCGGTAA AACCGAGACC ATCCATGGCT TGCACCGGGC CTTCGAACGC CGGCTGGACG
TGGCGGGGCG CAGCACTCGT CAAGGTCAAT CCGCGTCAGG CGCGGCGCTT TGCTGAAGCC
ACGGGCAAAC TGGCCAAGAC CGACCGGATG GACGCCGCAA TGCTTGCGCG CATGGGAGCA
CTCCTCGAAC TCGAAGCACG GCCGGTACGA AGCGCCATCC TCAACGATCT CAAGGATTTG
CACATGACCC GCGAGGCGCT GGTCAAGAAC CGTACTGCGG CCAGAAACAG AGCAAAAACC
TAACCTTGGC CATCCTCAAG CGACACAACA CCGAGCAACT CAGGCAGATC GAGCGTCAGA
TGATCGCGAT CGAAAAGAGA TTATGCTGCT CATTAAGAAC GATCCGGACC TTGCAGGCCG
CTTCGACATC CTTGTCCCGA TCCCGGGCCT GTCTGCAGTC ACTGCCTTCG CGCTCCTGAT
CGACATGCCG GAACTCGGCA CACTCGATCA AGGGCAGGCA GCCTCGCTCG CAGGCCTGGC
ACGCGTCGCA CGGCAGTCCG GCGCATGGCC CGGCCGCGCC TTCATCCGCG GCGGCCGGGC
CAATGTCCGG CAGGCCCTAT ACATGCCGGC ACTCGTCGCC ATGCGCTTCA ATCCCGATCT
CAAGGCAAAA TACGACCAGC TAAAGGCCGC CGGAAAAGCA CCAAAGGTTG CCATCACAGC
GATCGTGCGA AAACTCATCG TTCTGGCAAA CGCGCTGCTC ACGCACGGCG GAAAATGGGA
GCCGTCCTTG CCTTGA
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| Protein sequence | MMKDTIGDDI SKDQLDAHRM SNGAKRRFTN DTVGHRAFRV GSVKPRPSMA CTGPSNAGWT
WRGAALVKVN PRQARRFAEA TGKLAKTDRM DAAMLARMGA LLELEARPVR SAILNDLKDL
HMTREALVKN RTAARNRAKK PNLGHPQATQ HRATQADRAS DDRDRKEIML LIKNDPDLAG
RFDILVPIPG LSAVTAFALL IDMPELGTLD QGQAASLAGL ARVARQSGAW PGRAFIRGGR
ANVRQALYMP ALVAMRFNPD LKAKYDQLKA AGKAPKVAIT AIVRKLIVLA NALLTHGGKW
EPSLP
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