| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6269 |
|---|
| Symbol | |
|---|
| ID | 5320571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | - |
|---|
| Start bp | 1189124 |
|---|
| End bp | 1189579 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640777869 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
|---|
| Protein accession | YP_001314801 |
|---|
| Protein GI | 150378206 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3467] Predicted flavin-nucleotide-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.341844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0782266 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTTA GGCAAATGTC TCGTGAGGAA TGCGAAGGCG TGGTCGCCGC TGGAGATCTC
GCGCGGCTGG CATGCTGCAG GGACGGCCAG CCCTACATCG TGCCGATCAC CTACGCGAAC
TCGGGCCATA GGCTCTACTG TTACTCCATG CCCGGCCAGA AGATCGATTG GATGCGCAGC
AACCCGAAGG TGTCGCTCCA GATCGACGAG TTTGCCGGCA ATCGCCAGTG GAAGAGCGTG
GTCGTGACGG GCAGGTACCG AGAACTACCG GCCGCGCAAG GCCGCCATAA TGAGCGCATT
TACGCCTGGT CCCTGCTCGA AAAGAAACCC AATTGGTGGG AACCAGGGGG ACTTAAAACT
GCACCGCAAG AGATTTCGGG GGCGTCTGCA CATATCTTCT TTTGCATCGA GATAGACGAA
TTCACGGGGC GGGCAGCCTG CGAGGGTGAG CCATAG
|
|---|
| Protein sequence | MFVRQMSREE CEGVVAAGDL ARLACCRDGQ PYIVPITYAN SGHRLYCYSM PGQKIDWMRS
NPKVSLQIDE FAGNRQWKSV VVTGRYRELP AAQGRHNERI YAWSLLEKKP NWWEPGGLKT
APQEISGASA HIFFCIEIDE FTGRAACEGE P
|
|---|
| |