Gene Smed_6253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6253 
Symbol 
ID5320555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1173489 
End bp1174424 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content59% 
IMG OID640777853 
Productflavin reductase domain-containing protein 
Protein accessionYP_001314785 
Protein GI150378190 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.103541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.25638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGG AAGTTTTCGA CCCGAGAGCC TTGCGAGACG CGTTCGGCGC ATTTGCAACC 
GGAGTGACGG TGGTGACGGC GAGCGATGCG GCAGGCAAGC CAATCGGCTT TACGGCCAAT
TCCTTTACCT CTGTCTCATT GGATCCGCCG CTGCTGCTCG TTTGTCTTGC CAAGAGCTCG
CGCAATTATG ATTCGATGAC TTCGGCAGGG CGTTTCGCCA TCAACGTCTT GTCCGAAACG
CAAAAAGACG TCTCGAATAC ATTTGCCCGC CCCGTGGAGG ATCGGTTTGC AACGGTCGAT
TGGCGGCTTG GCCGGGACGG CTGCCCGATA TTCTCAGATG TGGCGGCCTG GTTCGAGTGT
TCGATGCAGG ACATCATCGA GGCGGGCGAT CATGTCATCA TAATCGGTCG CGTTACCGCC
TTCGAAAACA GCGGCCTCAA TGGCCTGGGT TACGCCCGGG GCGGCTACTT CACGCCGAGG
TTGGCAGGAA AGGCGGTTTC CGCTGCCGTT GAGGGAGAAA TTCGTCTCGG TGCGGTGCTC
GAACAGCAGG GCGCGGTATT TCTGGCAGGC AATGAAACCC TGTCGCTTCC GAATTGCACC
GTCGAAGGCG GCGATCCTGC GCGCACGCTC GCCGCCTATC TCGAACAACT GACCGGGCTG
AACGTCACCA TCGGATTTCT CTACTCGGTT TACGAGGACA AGAGCGATGG TCGTCAAAAC
ATCGTTTACC ACGCGCTTGC CAGCGACGGT GCACCACGAC AAGGCCGGTT TCTCAGGCCG
GCGGAGCTCG CTGCGGCCAA GTTCAGCAGC AGTGCGACCG CCGATATCAT CAATCGTTTC
GTACTCGAAA GCTCTATCGG CAATTTCGGC ATGTATTTCG GCGACGAGAC CGGCGGCACG
GTCCATCCGA TCGCGAAGAA GGACGTACAC TCATGA
 
Protein sequence
MTAEVFDPRA LRDAFGAFAT GVTVVTASDA AGKPIGFTAN SFTSVSLDPP LLLVCLAKSS 
RNYDSMTSAG RFAINVLSET QKDVSNTFAR PVEDRFATVD WRLGRDGCPI FSDVAAWFEC
SMQDIIEAGD HVIIIGRVTA FENSGLNGLG YARGGYFTPR LAGKAVSAAV EGEIRLGAVL
EQQGAVFLAG NETLSLPNCT VEGGDPARTL AAYLEQLTGL NVTIGFLYSV YEDKSDGRQN
IVYHALASDG APRQGRFLRP AELAAAKFSS SATADIINRF VLESSIGNFG MYFGDETGGT
VHPIAKKDVH S