Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6253 |
Symbol | |
ID | 5320555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1173489 |
End bp | 1174424 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640777853 |
Product | flavin reductase domain-containing protein |
Protein accession | YP_001314785 |
Protein GI | 150378190 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.103541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.25638 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGG AAGTTTTCGA CCCGAGAGCC TTGCGAGACG CGTTCGGCGC ATTTGCAACC GGAGTGACGG TGGTGACGGC GAGCGATGCG GCAGGCAAGC CAATCGGCTT TACGGCCAAT TCCTTTACCT CTGTCTCATT GGATCCGCCG CTGCTGCTCG TTTGTCTTGC CAAGAGCTCG CGCAATTATG ATTCGATGAC TTCGGCAGGG CGTTTCGCCA TCAACGTCTT GTCCGAAACG CAAAAAGACG TCTCGAATAC ATTTGCCCGC CCCGTGGAGG ATCGGTTTGC AACGGTCGAT TGGCGGCTTG GCCGGGACGG CTGCCCGATA TTCTCAGATG TGGCGGCCTG GTTCGAGTGT TCGATGCAGG ACATCATCGA GGCGGGCGAT CATGTCATCA TAATCGGTCG CGTTACCGCC TTCGAAAACA GCGGCCTCAA TGGCCTGGGT TACGCCCGGG GCGGCTACTT CACGCCGAGG TTGGCAGGAA AGGCGGTTTC CGCTGCCGTT GAGGGAGAAA TTCGTCTCGG TGCGGTGCTC GAACAGCAGG GCGCGGTATT TCTGGCAGGC AATGAAACCC TGTCGCTTCC GAATTGCACC GTCGAAGGCG GCGATCCTGC GCGCACGCTC GCCGCCTATC TCGAACAACT GACCGGGCTG AACGTCACCA TCGGATTTCT CTACTCGGTT TACGAGGACA AGAGCGATGG TCGTCAAAAC ATCGTTTACC ACGCGCTTGC CAGCGACGGT GCACCACGAC AAGGCCGGTT TCTCAGGCCG GCGGAGCTCG CTGCGGCCAA GTTCAGCAGC AGTGCGACCG CCGATATCAT CAATCGTTTC GTACTCGAAA GCTCTATCGG CAATTTCGGC ATGTATTTCG GCGACGAGAC CGGCGGCACG GTCCATCCGA TCGCGAAGAA GGACGTACAC TCATGA
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Protein sequence | MTAEVFDPRA LRDAFGAFAT GVTVVTASDA AGKPIGFTAN SFTSVSLDPP LLLVCLAKSS RNYDSMTSAG RFAINVLSET QKDVSNTFAR PVEDRFATVD WRLGRDGCPI FSDVAAWFEC SMQDIIEAGD HVIIIGRVTA FENSGLNGLG YARGGYFTPR LAGKAVSAAV EGEIRLGAVL EQQGAVFLAG NETLSLPNCT VEGGDPARTL AAYLEQLTGL NVTIGFLYSV YEDKSDGRQN IVYHALASDG APRQGRFLRP AELAAAKFSS SATADIINRF VLESSIGNFG MYFGDETGGT VHPIAKKDVH S
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