| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6246 |
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| Symbol | |
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| ID | 5320548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1166757 |
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| End bp | 1167836 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777846 |
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| Product | ABC transporter related |
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| Protein accession | YP_001314778 |
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| Protein GI | 150378183 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.836052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.532087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAC CCTTCCTGCA GATTCGCGGC ATCCGCAAGG AGTATGGCCC GGTGACGGCC
GTGCAAGATG TTACTATCGA TGTTGCACAG GGGGAATTCC TGACCTTTCT TGGCCCTTCG
GGATCCGGAA AAAGCACGAC GCTTTACATC CTGGCCGGCT TTGAGAACCC GACGCGCGGG
GACATCTTGC TAAATGGCGA AACGCTGCTG GCGACGCCTT CGCACAAACG CAATATCGGC
ATGGTGTTCC AGCGCTACAC GCTGTTTCCG CATCTTTCCG TCGGCGAGAA TATCGCCTTT
CCGCTAAAGG TCAGGCGTCT TCGGAAGGCG GAGATCGACG CCAAGGTGCG CGCGATGCTG
AAGCTCGTCC GGTTGGAAGG CTTTGAGGAC CGTAAGCCCG CTCAGATGTC CGGCGGCCAG
CAGCAGCGTG TGGCCTTGGC CCGCGCACTC GCCTATGACC CGCCAGTGCT GCTGATGGAT
GAGCCGCTTT CTGCCCTCGA CAAAAAGCTG CGCGAGGAGA TCCAGCACGA AATCCGCCGG
ATCCACCAGC AGACGGAAGT CACAATCCTG TATGTCACGC ATGACCAGGA GGAGGCACTT
CGTCTTTCCG ATCGCATTGC CGTTTTCTCA AAGGGCGTGA TCGATCAGAT CGGCACAGGG
CCGGAACTAT ACGCCAACCC GGCCACTCGG TTCGTGGCCG AGTTTATCGG CGACAGCGAT
TTTCTCCCTT GCGACGTGGT CTCGACGGTC AATGGCCGAG CCGATATTGC TGTGTGCGGT
TCCATGACCA TTTCGAACAT TCCGCTTCAT GGGACTGCTT CTTCGGGGAG CAAAGCGGCG
CTTATGCTGA GGCCGGAGCG GCTACTGTTG TCAAAGACGA AGTCAGACAT CGGGTTGCCG
GTCACGGTCA GCGATATCAC CTTCCTCGGC AACAACGTCC ATGTGGCCAC GAAAACCCGC
AAAGGCAACG ACCTGTCCGT CCGCCTTCCC TTCGGTCATG AAGCGATCTC GGGACTCAAT
CGGGGAGATG CCGTTTGGCT CAGATTCGAT GCCGGGTCGG CGCACGTTTT CGGTCAGTGA
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| Protein sequence | MNRPFLQIRG IRKEYGPVTA VQDVTIDVAQ GEFLTFLGPS GSGKSTTLYI LAGFENPTRG
DILLNGETLL ATPSHKRNIG MVFQRYTLFP HLSVGENIAF PLKVRRLRKA EIDAKVRAML
KLVRLEGFED RKPAQMSGGQ QQRVALARAL AYDPPVLLMD EPLSALDKKL REEIQHEIRR
IHQQTEVTIL YVTHDQEEAL RLSDRIAVFS KGVIDQIGTG PELYANPATR FVAEFIGDSD
FLPCDVVSTV NGRADIAVCG SMTISNIPLH GTASSGSKAA LMLRPERLLL SKTKSDIGLP
VTVSDITFLG NNVHVATKTR KGNDLSVRLP FGHEAISGLN RGDAVWLRFD AGSAHVFGQ
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