| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6233 |
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| Symbol | |
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| ID | 5320535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 1154850 |
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| End bp | 1156322 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777837 |
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| Product | nitrogenase cofactor biosynthesis protein NifB |
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| Protein accession | YP_001314769 |
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| Protein GI | 150378174 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACAC CCATGATTTT GCGTGAGAGC CGGACCAGCA CTACATTCTC TGACCAGTTG
CTGGAGAACG CTAAATCGCT TGGCTGCTCA CCTCCATCGA CGGCGCTGGG CGACATAGAT
CCTGGAACTT GGGACAAGAT TAAGAATCAC CCCTGTTTTT CAGAGGAGGC GCATCACTAT
TTCGCGCGCA TGCACGTGGC GGTCGCGCCT GCCTGCAACA TCCAGTGTAA CTACTGCAAT
CGCAAATACG ATTGCGCCAA CGAAAGTCGG CCCGGTGTTG CCTCGGAAAA GCTCACACCT
GACCAGGCGG TGCGAAAGGT GATTGCCGTT GCCAACGAAG TGCCTCAGCT GTCAGTGCTC
GGCATCGCTG GGCCTGGCGA TGCTTGTTAC GACTGGAAGA AAACAAGGGC GACGTTCGAA
CGAGTGGCTA GGGAAATTCC GGACATAAGA CTATGCATCT CCACGAACGG GCTCTCGCTG
CCGGACCATG TCGATGAGCT TGCCGAAATG AACGTCGATC ACGTGACGAT CACCATCAAC
ATGGTCGATC CGCGTGTCGG CGTAAAGATC TATCCCTGGA TTTACTATGG TCAGCGCCGC
CACACTGGTA TCGACGCTGC GAGAATCCTG CACGAACGGC AGATGTTGGG CCTGGAGATG
CTGGCCGAAC GCGGCATCCT CACCAAGGTC AACTCGGTAA TGATCCCCGG CGTCAATGAT
GAGCACCTGA TCGAAGTCAA CAAAGTTGTG AAAGGCCGAG GCGCGTTGCT GCACAACGTA
ATGCCGCTAA TTTCAAACCG AGTACACGGG ACCTATTACG GACTGACAGG GCAGCGCGGC
CCGGAGGCCT TCGAACTGCA GGCCCTTCAG GACCGTCTAG AAGGAACCAA ACTGATGCGT
CATTGTCGAC AGTGCCGGGC CGATGCCATA GGCTTGCTCG GCGATGATCG TGGTCACGAG
TTCACGCTCG CTGAGATCCC CGACGGGATA ACCTACGATG CCAGCAAGCG ACAGGCCTAT
CGCCAGTTGG TCGCGCGCGA ACGCGGGGAT CACCTAGTGG CCAAGAACGA GGCGATCAGA
ACGGTAATGT CGGTGGAGTA TGGCGGATCG CTTCTCATTG CCGTGGCGAC CAAAGGCGGG
GGCCGGATCA ACGAACATTT TGGACACGCG AAAGAATTTC ACGTTTACAC CGTCTCTCGG
AGAGGGATCA AGCTGGCAGG CCGCCGCAGG GTTGAGCAGT ATTGCCTCGG CGGCTGGGGC
GAGGACGCCA CCCTCGACCA CATCGTCAAT GCGCTTGAAG GAATAGACAT TCTGCTCTGC
GTCAAGATCG GAGATTACCC AAGGAAACAG CTGACACAGG CCGGGCTTCG AGCGACGGAA
GCTTACGGCC ATGACTACAT CGAGAGTGCG CTCGGCGCGC TCTACGCCGC CGAGTTTGGC
ATCGAACCAC CGGTAAAGAC GGCGACAGCT TGA
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| Protein sequence | MFTPMILRES RTSTTFSDQL LENAKSLGCS PPSTALGDID PGTWDKIKNH PCFSEEAHHY
FARMHVAVAP ACNIQCNYCN RKYDCANESR PGVASEKLTP DQAVRKVIAV ANEVPQLSVL
GIAGPGDACY DWKKTRATFE RVAREIPDIR LCISTNGLSL PDHVDELAEM NVDHVTITIN
MVDPRVGVKI YPWIYYGQRR HTGIDAARIL HERQMLGLEM LAERGILTKV NSVMIPGVND
EHLIEVNKVV KGRGALLHNV MPLISNRVHG TYYGLTGQRG PEAFELQALQ DRLEGTKLMR
HCRQCRADAI GLLGDDRGHE FTLAEIPDGI TYDASKRQAY RQLVARERGD HLVAKNEAIR
TVMSVEYGGS LLIAVATKGG GRINEHFGHA KEFHVYTVSR RGIKLAGRRR VEQYCLGGWG
EDATLDHIVN ALEGIDILLC VKIGDYPRKQ LTQAGLRATE AYGHDYIESA LGALYAAEFG
IEPPVKTATA
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