Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6221 |
Symbol | |
ID | 5320523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1140378 |
End bp | 1140875 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640777826 |
Product | nitrogen fixation protein NifX |
Protein accession | YP_001314758 |
Protein GI | 150378163 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02663] nitrogen fixation protein NifX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.550036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCTCCA TTCGTCGTCT CTCGCTCGTC AGCAATCAGT CCCAGAGAGA GATTTCGGAC CGGCCGTTAG GCGCATTGCG CATTGCGATT GCTACTGAAG ATATCAAAGG GCTGAACGCA CATTTCGGGT CGGCCAAGCG TTTTGCCATC TACGACGTGA CAGCTCACAA GTCGCAGTTC ATGGAAGCCA TCGAGTTCGA TAACGCTTCG GACGAGAGCG GAAGGCATCG CACTGAAGGT GACGGCCGCA TCCGGTCGAG GGTGTCCGCG TTGAAGGGCT GCCAGCTTTT ATTTTGTCTC GCCATCGGGG GTCCTTCGGC CGCCAAGGTA ATTTCCGCAA AGATTCATCC CATCAAAGCA CAGCAGGCTG TCTCCATGAG CCAAGTATTG TCGAGCGTCC AGACAATGCT CCAGACGGCT CCTCCACCTT GGCTGCGTAA AATGTTGGCG GATGCAGGTG CAGCTAAAAA GAGAGCCGAC TTTGAGGACG AGGACTGA
|
Protein sequence | MISIRRLSLV SNQSQREISD RPLGALRIAI ATEDIKGLNA HFGSAKRFAI YDVTAHKSQF MEAIEFDNAS DESGRHRTEG DGRIRSRVSA LKGCQLLFCL AIGGPSAAKV ISAKIHPIKA QQAVSMSQVL SSVQTMLQTA PPPWLRKMLA DAGAAKKRAD FEDED
|
| |