| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6185 |
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| Symbol | |
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| ID | 5320487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 1107713 |
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| End bp | 1108366 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777803 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001314735 |
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| Protein GI | 150378140 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.307071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACC TCGATTATAT ACACGAGGTG CCGAGCAACT GCGATTACGG GACCGAAGAT
CCTAGTATAT ACCTGACGTT TGACGACGGC CCGAATCCAC ATTGCACACC GGAAATCCTG
GATGTGCTGG CTGAGTACGG CGTACCGGCG ACTTTCTTCG TCATCGGCAC CTATGCGAAA
AGCCAGCCGG AACTCATTCG ACGTATCGTC GCGGAAGGTC ACGAAGTGGC TAACCACACG
ATGACCCACC CGGACCTGTC AACATGCGGA CCTCACGAAG TCGAACGTGA GATTGTCGAG
GCAAGTGAGG CCATTATCGC CGCTTGTCCT CAGGCAGCGG TCCGACACAT ACGAGCACCT
TATGGTGTCT GGAGCGAGGA AGCGCTGACA AGATCGGCGA GCGCTGGGCT GACGGCAATA
CATTGGTCGG CAGATCCGCG AGATTGGTCT CGGCCAGGCG CCAACGCGAT TGTTGATGCA
GTGCTGGCAT CGGTTCGGCC CGGTGCGATC GTGCTGTTGC ACGATGGATG CCCTCCCGAC
GAAACGGGAG CGCTTACGGG TCTGCGTGAC CAAACGCTTA TGGCAATTTC CCGTGTGATC
CCGGCGCTGC ACGAGCGTGG TTTTGCAATT CGCCCACTTC CTCCGCATCA CTGA
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| Protein sequence | MKHLDYIHEV PSNCDYGTED PSIYLTFDDG PNPHCTPEIL DVLAEYGVPA TFFVIGTYAK
SQPELIRRIV AEGHEVANHT MTHPDLSTCG PHEVEREIVE ASEAIIAACP QAAVRHIRAP
YGVWSEEALT RSASAGLTAI HWSADPRDWS RPGANAIVDA VLASVRPGAI VLLHDGCPPD
ETGALTGLRD QTLMAISRVI PALHERGFAI RPLPPHH
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