Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6101 |
Symbol | |
ID | 5320403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1034185 |
End bp | 1034829 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640777741 |
Product | methyltransferase type 11 |
Protein accession | YP_001314673 |
Protein GI | 150378078 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.372421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTGG GCGGCCCTCT TACGATGCTG CAAGCCTTCC GGTTTGGTGA AAGCGACCGG GACCATGTGT CCCGATTGCT GCATTGGGCG GACTTTCCCA ACAGTGCACG TATTGTGGAC CTCGGCGCTG GCAGCGGCGG GGTCGCGGCC CATATGGCGG CTTTGCGTCC GGATTTACGT TTCTGTCTGG TCGATCTGGA TGAAACGAAA CTGGCGGCCA GTTCATTCGA AAAACACATT GCAAATATAA CGCAAGTCCC AGAACCCGAT GGTGCATTCG ACGCGGCGAT TTGCTGTTAC GCAATGGGTT ATGCGCCTTC GGATGCGCTA TGGTCGGAGA TTTCACGCCT TCTGCGACCG GGTGGCACTG TTTTTATCGT GGATATGGTG CCCAAGGATG CCACGATCCC GAAGCTTAGC CTGTTCGGCT ATGAGATACG GAGCCGTGGG ATGGTCGAGG AAGCGGCGCA ATCTGTTGGT TTGATACCGG ATGTCTATAT CGAGCCGTAT GATTCCGGCG ATTGGGGCCG GTCCGTCTTT TCGGATGCTT TCGATGTATT CTTCGGCGAT CTGCGGCCCG CCATCTGGTG CTGGCGCGCG CCCGAAACCA AGACCGTCGC TCACCCCTCG ACCACCCAAG CGTGA
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Protein sequence | MSVGGPLTML QAFRFGESDR DHVSRLLHWA DFPNSARIVD LGAGSGGVAA HMAALRPDLR FCLVDLDETK LAASSFEKHI ANITQVPEPD GAFDAAICCY AMGYAPSDAL WSEISRLLRP GGTVFIVDMV PKDATIPKLS LFGYEIRSRG MVEEAAQSVG LIPDVYIEPY DSGDWGRSVF SDAFDVFFGD LRPAIWCWRA PETKTVAHPS TTQA
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