Gene Smed_6101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6101 
Symbol 
ID5320403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1034185 
End bp1034829 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content58% 
IMG OID640777741 
Productmethyltransferase type 11 
Protein accessionYP_001314673 
Protein GI150378078 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.372421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGG GCGGCCCTCT TACGATGCTG CAAGCCTTCC GGTTTGGTGA AAGCGACCGG 
GACCATGTGT CCCGATTGCT GCATTGGGCG GACTTTCCCA ACAGTGCACG TATTGTGGAC
CTCGGCGCTG GCAGCGGCGG GGTCGCGGCC CATATGGCGG CTTTGCGTCC GGATTTACGT
TTCTGTCTGG TCGATCTGGA TGAAACGAAA CTGGCGGCCA GTTCATTCGA AAAACACATT
GCAAATATAA CGCAAGTCCC AGAACCCGAT GGTGCATTCG ACGCGGCGAT TTGCTGTTAC
GCAATGGGTT ATGCGCCTTC GGATGCGCTA TGGTCGGAGA TTTCACGCCT TCTGCGACCG
GGTGGCACTG TTTTTATCGT GGATATGGTG CCCAAGGATG CCACGATCCC GAAGCTTAGC
CTGTTCGGCT ATGAGATACG GAGCCGTGGG ATGGTCGAGG AAGCGGCGCA ATCTGTTGGT
TTGATACCGG ATGTCTATAT CGAGCCGTAT GATTCCGGCG ATTGGGGCCG GTCCGTCTTT
TCGGATGCTT TCGATGTATT CTTCGGCGAT CTGCGGCCCG CCATCTGGTG CTGGCGCGCG
CCCGAAACCA AGACCGTCGC TCACCCCTCG ACCACCCAAG CGTGA
 
Protein sequence
MSVGGPLTML QAFRFGESDR DHVSRLLHWA DFPNSARIVD LGAGSGGVAA HMAALRPDLR 
FCLVDLDETK LAASSFEKHI ANITQVPEPD GAFDAAICCY AMGYAPSDAL WSEISRLLRP
GGTVFIVDMV PKDATIPKLS LFGYEIRSRG MVEEAAQSVG LIPDVYIEPY DSGDWGRSVF
SDAFDVFFGD LRPAIWCWRA PETKTVAHPS TTQA