| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6037 |
|---|
| Symbol | |
|---|
| ID | 5320339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 986882 |
|---|
| End bp | 987427 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640777699 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_001314631 |
|---|
| Protein GI | 150378036 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3658] Cytochrome b |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.151215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.371454 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGA CGTCGACAGT CAAGGTCTGG GATCGTCCGA TCAGGCTCTT TCACTGGAGC
CTCGCGGGCA GTGTCGCCTT GTGCTGGTTG ACGGCGGACG AGTTGCAGAG CCTGCACGAG
GTGGCGGGCT ATGCGGTCGC AGGCCTGGTC GGCCTGCGAC TCGCTCTCGG CTTGGCCGGG
ACGCGCTATG CCCGCTTTAG CCAGTTCATC CGCTCGCCCA GGCGCACGCT TCTCTATGCC
GGCGATATGC TGCGCCACAA GGAACCCCGC TATCTCGGCC ACAACCCGCT CGGGGCCGTA
ATGGTCGTCC TCCTGCTTCT GATGGTCGGT GGCATCGCGC TCACCGGCTG GATGCAGACC
ACGGATGCCT ATTGGGGCGT CGAATGGGTC GAGGAAACGC ACGAAGCCCT GGCTGAACTG
CTGCTGGTGG CGATCGCACT GCATGTGGTC GGCGTGATCC ATGCAAGCCT CCGGCACCAT
GAGAACCTGG TTCTCGCCAT GATCACCGGT CGCAAACGGG CGCCCGCTGG CGGCGACATT
CTCTGA
|
|---|
| Protein sequence | MAMTSTVKVW DRPIRLFHWS LAGSVALCWL TADELQSLHE VAGYAVAGLV GLRLALGLAG
TRYARFSQFI RSPRRTLLYA GDMLRHKEPR YLGHNPLGAV MVVLLLLMVG GIALTGWMQT
TDAYWGVEWV EETHEALAEL LLVAIALHVV GVIHASLRHH ENLVLAMITG RKRAPAGGDI
L
|
|---|
| |