Gene Smed_6001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6001 
Symbol 
ID5320303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp958095 
End bp958547 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content61% 
IMG OID640777677 
Producthypothetical protein 
Protein accessionYP_001314609 
Protein GI150378014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.798842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.186045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTGG CGCTCGCTGT CCCCGATCAT ACCACCCTGA GCCGTCGGGC GCGAACATGG 
CAATCGCCCA ACAAGGCGCA TGCCCCCCAG GGCCGACCGG ACGGGCCAGT GCATATTCTT
GTCGACAGCA CTGGACTGCA GGTCTACGGC GCAGGCCAAT GGTTGGAGGA GAAGCATGGC
GCCAGATACC GCCGTGGTTG GCGAAAGCTG CATGTGGCAC TGGATGCCGA TAGCAGCGAG
ATCATTGCAC ATACGATGAC CGACCAGGAC GCGGGCGACG CATCGCAGGT GGAGCCGTTG
CTCAACCAGA TCGATGGTCG GATCGGGCAG TTCACAGCCG ACGGCGCCTA TGACGGGAAG
CCCACCAACG ACGCAGTCAC CGACCAAGGT ATTTTGCTCG AATGCCTATG GCGCGACAAT
CAGCATGATA CCTTCGTGCC GACCGCGACA TAA
 
Protein sequence
MGLALAVPDH TTLSRRARTW QSPNKAHAPQ GRPDGPVHIL VDSTGLQVYG AGQWLEEKHG 
ARYRRGWRKL HVALDADSSE IIAHTMTDQD AGDASQVEPL LNQIDGRIGQ FTADGAYDGK
PTNDAVTDQG ILLECLWRDN QHDTFVPTAT