| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5990 |
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| Symbol | |
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| ID | 5320292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 947701 |
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| End bp | 948720 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777666 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001314598 |
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| Protein GI | 150378003 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0730403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.114286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGG CACGCAAGCG AGATATATAT TTCAGCTTCT TTATGTTTAC AGCGGATTTG
AGGCCAAACG ATGCGGGCTA CGCTGAGGTT CTCGTCCGAC ATCTGAAGGC CCTTACCGCC
ATCGGCTACA CTGGCTTCGA TGTGCATATC GCCCCGGGAC TGGCCCACGA CGGCCATCAC
GTTGAAGTCG AGAGCTATGC CCGCCTGAAG GAGGCGTTCG ATCGGGCGGG CTTCCAGGAC
GTGAAGTTCA CAACCAATGT GGGGACCACG CGAACCTTCG ATCCGACCTC GCCCTACCAG
GAACAGCGCA AGCAGGCTCT CGCTTATCTC AAATCCCGCG TCGATATTAC CTCGGTGCTG
GGTGGGGAAA ATACGATAAT GTCTGGGCCG TTCCTCTACC CCTATGGCAT CTTTCCGCTT
ACCGATGACG GTGAAGAGAT CTGGAGCGAC GCGCTTCAGG ATTGGGTAGC GCCCCGATTC
GCGGCGGCGG GCTCCGTCTT CCGGGAGTTG GCGGAATATG CTTCCGAGAA GAAAGTGAAG
CTTGCCATCG AGCCCGTCAA GAACTGGGAA ACGCCTGCGC CCACCATGGT TTCGGAAGCG
CTGGATTTTC TCGAAAGGGC CGACGTCCCG CTCTGTGGCG TCACGATCGA TACAGCCCAG
GTGGTAATGG AAAGCCAGGG CCCGGCAATA TTCAGGAAAA ATGTCGCCCG TGCCGCACAG
CAATGCCGGC TGAATTACGT TCATATCTCG GCCCCGGACC GGGGCGCCGT CAAAGACAGC
TGGATTCCGT GGGAGATTAT GTTCGGCGAA ATCGAGCCGG TCTATTCCGG CCCCTATCTC
GTCGAAATCT TTAATGCGAT TCCCCCCTTC GACAGCTCCA TGAGAATGAC GCGCAGACGC
TTCTGGCGGC CCGGTGAGGA CGAGCCGGAA GCGGGCGTCG ACAGTGCCTA CGAGGTTGCG
CGCGCCGCCC TGACGACATT GCAGGAAAAG ATCGCTTCCC ACGGCCGATC TCATCCGTGA
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| Protein sequence | MSQARKRDIY FSFFMFTADL RPNDAGYAEV LVRHLKALTA IGYTGFDVHI APGLAHDGHH
VEVESYARLK EAFDRAGFQD VKFTTNVGTT RTFDPTSPYQ EQRKQALAYL KSRVDITSVL
GGENTIMSGP FLYPYGIFPL TDDGEEIWSD ALQDWVAPRF AAAGSVFREL AEYASEKKVK
LAIEPVKNWE TPAPTMVSEA LDFLERADVP LCGVTIDTAQ VVMESQGPAI FRKNVARAAQ
QCRLNYVHIS APDRGAVKDS WIPWEIMFGE IEPVYSGPYL VEIFNAIPPF DSSMRMTRRR
FWRPGEDEPE AGVDSAYEVA RAALTTLQEK IASHGRSHP
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