| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5980 |
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| Symbol | |
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| ID | 5320282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 937694 |
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| End bp | 938572 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777658 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001314590 |
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| Protein GI | 150377995 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.307628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCC CCTATGAATT CTCTTCGATG ACCGCCCTCG TCTGCTTCGA GGCGGCGGCG
CGAAATGCGA GCTTCAAGAA AGCCGCTCAA GAGATGAATG TCACGCCAGC GGCCATCAGC
CACCAGATCA AGGCACTGGA GATGGACCTC AAATGCAGCC TGTTCCTGCG CCACCACCGC
GGTGTCGAAC TGACCGAGAA GGGAGCGCTC CTCTTCGTGG TCATTCAACG CGGCTTCGAG
ACGATCTCGG AAACTCTTAC CCAGATCCGC GAGCGGCCGG AAACCGTCGA CGTGACCATC
GGCGCGACCA CGGCGTTCAG TTCACTATGG CTGACACCGA AGATTTCGGC CTTTTGGAAG
ATCCATCCCT CCATCACCGT CTCACAGGTC GTCAGCGATG TGCCTGGAAT GACCAGCCGT
TGCGATCTGA CTATCCATTA CAGCAACCCG CAGGAGAACG GCGTAGAATA CCGGAAACTC
TTTCAGGACC ACATTGTGGC GCTGGGAACG ACACGATTTG CCGCCGAGCA CCGCATTGCC
CGGCTCGAGG ATCTGCTCAA AGCACCCTTG ATCCATTCCA GCAGCAACGA GACCGGTTGG
ACGGCCTGGG ACGATTGGTT TGCCGTACTC GGATGTCCCG CCCCGAAGGG CCGCAGTTTT
TACGTCAACA ATTACATGAT CGCACTTCAG GCGGCTCAAG ACGATGTCGG GGCGGTACTT
GGGTGGGACG GGCTCGTCGG GAGCCTTATC GAAGAAGGGC GTCTGGTGAA ACTCGTGCAA
GAAAGCATCC CCTCACCCGT CGGTTTTCAT CTGAGGATCC ATTCGCGCGC AACGGCAAAG
GCGCGGCTGT TCGCCGACTG GCTAGTCAAA GCCATCTAA
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| Protein sequence | MPRPYEFSSM TALVCFEAAA RNASFKKAAQ EMNVTPAAIS HQIKALEMDL KCSLFLRHHR
GVELTEKGAL LFVVIQRGFE TISETLTQIR ERPETVDVTI GATTAFSSLW LTPKISAFWK
IHPSITVSQV VSDVPGMTSR CDLTIHYSNP QENGVEYRKL FQDHIVALGT TRFAAEHRIA
RLEDLLKAPL IHSSSNETGW TAWDDWFAVL GCPAPKGRSF YVNNYMIALQ AAQDDVGAVL
GWDGLVGSLI EEGRLVKLVQ ESIPSPVGFH LRIHSRATAK ARLFADWLVK AI
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