| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5948 |
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| Symbol | |
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| ID | 5320250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 909344 |
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| End bp | 910120 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777636 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001314568 |
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| Protein GI | 150377973 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.102171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCT TCGTCGCGAC TTCCGCAAAG GACAATAGAG AGGCTCGCCG ACTCGCTCCT
TTTCGCTCTT TCGACAACCC GCGCCCCCGA ACGGGCAAGG ACAAGCCGCA TTTCGAGAGC
ATCGCCGCAG GGATCAACGC GATCAGCGCA TTGCGCGACA AGCCTTCCGG CGACGTACGG
GTGGTCTGCC CCGACGATGC GGTCGAGCTC GTGTTCCGCC GTCGGCTCTC GGCATTCCTG
CGGGACTTCC CAGACGTAAC GGTGGAGATT ATCGTCGACA ATGGCTTCAC CAACATTGTC
GAGCGGCAGT TCGACGCTGG CGTCCGTCTT GGCGAGGCCG TTGCCCGAGA TATGGTGGCC
ATGCGCATAG GACCCGACGT GTCATATTCC GTCGTGGCCT CGCCCGACTA TCTGGAGCGG
CATGGGCCGC CGTCAAACCC GCAGGACCGC AGGCCACAAC TGCGTCAACC TTCGGCTTCC
AACGTCCGAG GGCTTTATGC CCGGGAATTC GAGCGGGACG GCCGTGGGTT CAGCGTGCGG
GTGGAGGGCC AGCTCACCTT GAGCAACATC GCTCCGGCGA TAGACGCTGC ATTGGACGGT
ATCGGTCTTG CCTACGTGCC CACGGACCTC GTCTTGCAGC ATGTCGAGCG TGGTCGGCTG
CGGCAGGTAC TTTCGGACTG GTGTCCAACC TTCCAAGGCT ATCATCTCTA TTATCCGAGC
CGGCGCAATC CTTCGCCAGC CTTCTCGGCG TTCGTCGACG CTTTCCGGCA TAGATAG
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| Protein sequence | MARFVATSAK DNREARRLAP FRSFDNPRPR TGKDKPHFES IAAGINAISA LRDKPSGDVR
VVCPDDAVEL VFRRRLSAFL RDFPDVTVEI IVDNGFTNIV ERQFDAGVRL GEAVARDMVA
MRIGPDVSYS VVASPDYLER HGPPSNPQDR RPQLRQPSAS NVRGLYAREF ERDGRGFSVR
VEGQLTLSNI APAIDAALDG IGLAYVPTDL VLQHVERGRL RQVLSDWCPT FQGYHLYYPS
RRNPSPAFSA FVDAFRHR
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