Gene Smed_5933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5933 
Symbol 
ID5320235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp896819 
End bp896971 
Gene Length153 bp 
Protein Length50 aa 
Translation table11 
GC content59% 
IMG OID640777626 
ProductCbb3-type cytochrome oxidase component 
Protein accessionYP_001314558 
Protein GI150377963 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4736] Cbb3-type cytochrome oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.404492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.435436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGT ACACTGCCAT GCGGCATTTC GCCGATAGCT GGGGATTGCT CGCCATGACG 
TTGTCCTTCC TCGGCGTCGT CTTTTTCATC TTCCGCCCCG GCGCCAAGAA GGCTGCCGCT
CAGGCGTCTG TCATCCCGCT GAAGGAGGAC TGA
 
Protein sequence
METYTAMRHF ADSWGLLAMT LSFLGVVFFI FRPGAKKAAA QASVIPLKED