Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5929 |
Symbol | |
ID | 5320231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 891378 |
End bp | 893651 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640777622 |
Product | copper-translocating P-type ATPase |
Protein accession | YP_001314554 |
Protein GI | 150377959 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.711138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGCT GCGCCGTTGG TGCGGCAACC ATGGTTGCCG AAGGAAGGCA GGCGTCGCCC GCGTCCGAGG AACTTTGGCT TGCGAGCCGG GCCCTCGGAG GCGGGTTGCG CCAGACGGAG CTAAGCGTCC CCGGCGCATA TTGCGGCGCC TGCATCGCCA CGATCGAAGG AGCGCTGCGC ACCAAGCCCG AAGTCGAACG CGCCCGCGTC AACCTCTCCT CCCGTCGCGT TTCAATCGTC TGGAAAGAGG AGGTCGGCGG TCGTCGGACC GATCCTTGTG ATTTCTTGCA TGCCATCGCC GAGCGTGGAT ATCAGACACA CCTCTTTTCG CCCGGCGGGG AGGAAGGCGA CGACCTGCTG AAGCAGTTGA TCCTCGCGGT CGCCGTTTCC GGCTTCGCCG CGACCAATAT TATGCTGCTC TCCGTGTCAG TCTGGTCCGG GGCAGATGCG GCCACCCGCG ATCTCTTTCA TTGGATCTCG GCGCTTATCG CCGGACCGGC GCTGATCTAT GCTGGCCGCT TTTTCTACAA GTCGGCATGG AACGCCGTTC GCCACGGGCG AACCAACATG GATGTGCCGA TCGCGCTCGC CGTCAGCCTT TCCTATGGCA TGTCGCTCCA CGAGACGATC GGTCATGGCG AACATGCCTG GTTCGATGCA TCCGTGACCT TGCTGTTTTT CCTGCTGATC GGCAGAACGC TTGATCACAT GATGAGGGGC CGTGCACGAA CGGCGATCAG CGGTCTCGCA CGCCTGTCGC CACGCGGGGC CACCGTCGTT CATCCGGATG GCTCGCGCGA GTACCGCGCC GTCGACGAGA TCAAGCCAGG TGAACGCCTG ATCGTCGCTG CTGGCGAGCG TATCCCCGTC GATGGACGGG TGGTGTACGG GACGAGCGAT ATCGATCGGT CCGTGGTCAA CGGCGAGAGC TCGCCGGCGG TGGTCGCCAC AGGGGATACG GTTCAGGCCG GCACGCTCAA CCTTACGGGT CCGCTGACGC TGGAGGCGAC CGCCGCGGCG CGCGATTCGT TCATCGCCGA AATCATCGGA ATGATGGAGG CTGCCGAGGG GGGGAGGGCG CGCTACCGAC GTATCGCCGA CCGCGCCGCT CGCTTTTATT CGCCCGCCGT CCATCTGCTG GCGCTTCTGA CCTTCGTCGG CTGGATGCTG GTGGAGGGAG ATGTCCGCCA TGCCCTGCTG ATCGCGGTGG CGGTGCTCAT CATCACATGC CCCTGCGCAC TCGGTCTTGC CGTTCCGGTC GTCCAGGTCG TTGCAGCCGG TCGGCTATTC CAGGGCGGGG TGATGGTCAA GGATGGCTCG GCAATGGAGC GTCTCGCCGA GATCGACATG GTGCTCCTCG ATAAGACCGG CACGCTGACC ATCGGCAGAC CGCGGCTCGT GAATGCGCAC GAGATCGCAC CTTGTCGGCT CGCGAAGGCG GCGGCTATCG CGTTGCATTC GCGCCATCCG ATCGCAGTAG CGATTCAGAA TTCGGCACGG GCAGTCTCGC CGCTTGCCGG CGGCATCCGG GAAATTCCCG GCGCGGGCAT CGAAGTGAAA ACCGAGGACG GCGTCTACCG GCTCGGGAGC CGCAATTTTG CGGTCGGCAA TCCGGGCTCT GACGGCGGAC AATCGCAGGC AATCCTGTCG TTGGATTTTC GCGAGCTTGC CTGCTTTCGG TTCGAGGACC GGCCGCGCCC GGCTTCGCGC GAATCGATCG AAGCCCTTGC CCGACTGGAC ATTGCGACCG GAATCCTGTC CGGCGATCGG GAACCCGTGG TGGCGGCCCT CGCCGGCAGC TTGGGGATTT CGAATTGGCA TGGCGACCTC TCGCCACGCG AAAAGGTCAA GGCATGCGAC GCTGCCGCCG AGGCAGGTCA CAAGGCACTG GTAGTGGGGG ACGGCATAAA CGACGCGCCC GTTCTGCGTG CAGCGCATGT TTCCATGGCT CCGGCGACTG CCGCCGATGT CGGACGCCAG GCCGCCGACT TCGTCTTCAT GCATGAGCCG CTTTCGGCAG TTCCCTTCGC CATCGAGACT TCGCGACATG CCGGCCGACT TATCCGGCAG AACTTCGCGC TCGCCATCGG CTACAACGTC ATCGCCGTAC CAATCGCAAT TCTTGGTTAC GCGACTCCGC TCATTGCCGC TGTAGCGATG TCCACCTCGT CGCTAGTGGT AGTCTTCAAT GCTCTGAGAC TGAAGCGAAC CCTTGCTGCC GGTAAGGTCG CGAAAGCAGC CGCATTGATC CAATCAGGGG CGGTGACCTC ATGA
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Protein sequence | MSCCAVGAAT MVAEGRQASP ASEELWLASR ALGGGLRQTE LSVPGAYCGA CIATIEGALR TKPEVERARV NLSSRRVSIV WKEEVGGRRT DPCDFLHAIA ERGYQTHLFS PGGEEGDDLL KQLILAVAVS GFAATNIMLL SVSVWSGADA ATRDLFHWIS ALIAGPALIY AGRFFYKSAW NAVRHGRTNM DVPIALAVSL SYGMSLHETI GHGEHAWFDA SVTLLFFLLI GRTLDHMMRG RARTAISGLA RLSPRGATVV HPDGSREYRA VDEIKPGERL IVAAGERIPV DGRVVYGTSD IDRSVVNGES SPAVVATGDT VQAGTLNLTG PLTLEATAAA RDSFIAEIIG MMEAAEGGRA RYRRIADRAA RFYSPAVHLL ALLTFVGWML VEGDVRHALL IAVAVLIITC PCALGLAVPV VQVVAAGRLF QGGVMVKDGS AMERLAEIDM VLLDKTGTLT IGRPRLVNAH EIAPCRLAKA AAIALHSRHP IAVAIQNSAR AVSPLAGGIR EIPGAGIEVK TEDGVYRLGS RNFAVGNPGS DGGQSQAILS LDFRELACFR FEDRPRPASR ESIEALARLD IATGILSGDR EPVVAALAGS LGISNWHGDL SPREKVKACD AAAEAGHKAL VVGDGINDAP VLRAAHVSMA PATAADVGRQ AADFVFMHEP LSAVPFAIET SRHAGRLIRQ NFALAIGYNV IAVPIAILGY ATPLIAAVAM STSSLVVVFN ALRLKRTLAA GKVAKAAALI QSGAVTS
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