| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5920 |
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| Symbol | |
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| ID | 5320222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 883292 |
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| End bp | 885559 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640777613 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_001314545 |
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| Protein GI | 150377950 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.509848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTGCT GCTCCGGCAT TGCTGTTCCA ATCACCGCGG GCGCGGGCGA CAAGTCAGCG
CGTGCGGAGG AGATCCGCCT GGCAAGCCGC GACCTGGGCG ACGGTCTTCG CCAGACCATA
TTGACGCTGC CCGATGTACA TTGCGCAGCC TGTATTGCTG CCGTGGAACG CGCTCTCCGG
AAAATCTCCG GCGTCGAGCT TGCCCGAGTG AACCTGTCGA GCCGTCGGGT CACCATCAAC
TGGCGGGGCA ATGACGACGA GAGTTCGGAT TTCGCCGCGG AACTTGCCAA AATCGGCTAT
GCCTCGCATC TGGCCTCCAT CGAGGAGGAC GGCCAGGATC CAGTACTTTC CTCCCTCTTG
AAGGCGCTCG CGGTCGCCGG TTTCTCGGCG ATGAACATCA TGATCCTCTC GGTATCGGTC
TGGTCCGGAG CCGATCCCGC GACGCGCCAT GCTTTCCATC TGATCTCGGC GGCGCTCGCT
CTGCCGGCGA TCGTCTATTC CGGCAGGGTC TTCTACCGCT CGGCCTGGGA GGCACTGCGG
CATGGTCGCA CCAACATGGA CGTACCGATC AGCGTCGGCG TTCTCCTCGC CTTCGCGCTC
AGCGTCTACG ACACCCTTCA CAACGCGGCC TATGCCTATT TCGACGCAAG TACTTCGTTG
TTGTTCGTCC TGCTGGCAGG GCGGACGCTG GACCACCTGA TGCGGGGCAG GGCGCGTTCC
GCCGTGGGAG CGCTTGAAAG GCTCGCGCCG CGGGGCGCCA ATGTCATCCG GGCGGACGGC
GCGATCGATT ACGTGCCGCT TTCCGAGATC AAGCCGGGCA TGCATTTGCT CGTCGCCGCC
GGAGAGCGCG TGCCGGTCGA CGGCGTTGTC GTCAAAGGAG CCTCGGAGCT CGATTGTTCT
CTCGTTTCAG GGGAGAGCGC GTGGAAGCGT GCCGAGCCGG GAAGCGCGCT GCAGGCAGGC
GTGATGAACG TAGGCAATCC GCTGACCCTG TTGGCGACCG TGTCCGCCGA CGGTTCCTTT
CTGGCCGAAA TGACCCGCAT GATGGAGGCT GCCGAGAGCG GGCGCTCCAC TTACCGTCGC
ATCGCTGATC GCGCCGCAAG CCTGTACGCG CCTGTCGTGC ACGGCGTCGC CCTCCTTTCG
ATGTTCGGGT GGTTTTATGG AACCGGAGAT CTCCACAAGT CCGTCACCAT TGCCATAGCC
GTGCTGATCA TTACCTGCCC CTGCGCCCTT GGACTTGCCG TTCCGATGGT GCAGGTGGTC
GCGGCCCGGC GCCTCTTCGA ACGAGGCATC ATGGCGCGCG ACGGATCCGC ATTCGAGAGG
CTGAACGACA TCGACACCGT GCTCTTCGAC AAGACCGGAA CGCTGACCCT CGGCGAGATG
CGCCTGGTCA ACGCGGGCGA CCTTCAGCCC CGGCTCCTGT CGCTGGCAGC CGCGATGGCG
AGGGTCTCGC GGCATCCCGC GTCCACCGCC ATCGCTCTGG CGGGCGCCGG ACGGCACACC
GCGCCTGTGG AGTTCGACAG CCTGGAGGAG GTTCATGGCT GCGGAATCGA GGGTCGGGCA
GGGGACGCGG TCTACCGGCT CGGACGCCCG TCGTGGGCGT CGAATGCGAC GCAAGTCGAC
CTGGGAACGT CTTCGGCAAC CGTGCTGTCG AAGGACGGCG AAACGACAGC GGTTTTCGCG
TTCGAGGAAT CCGTCCGCCC CGGTGCTCGC GAGCTTGTCC AGACGCTGCG CTCGGCCGGC
GTTTCGGTGC GCATCTTTTC GGGAGATCGT AGTGCCGCGG TTTCGTCCAT CGCCGGGCAA
TTGGAAATCG AGGCGTTCTC GGCTGAGCTG CTTCCGGATG AAAAGGTCGA GGCCATCAGG
GCACTCGCGG CGAAAGGCCG CAAGGTGCTG ATGATCGGCG ATGGTCTCAA CGACGCGCCG
GCGCTGGCGG CCGCGCACGT GTCGATCGCC CCGTCGTCGG CAACGGACGT CGGACGGAGC
GCATCCGACT TCGTCTTTCT CGGACAGAGC CTGCTGGCTG TCCGAGACAT CATCCTGACC
GCGGCGAGGG CCGACGTGCT GATCCGTCAG AACTTCGCAA TGGCAATCGC CTACAATGTC
GTCAGCGTGC CCTTCGCGAT TGCCGGACTG GTTACGCCGC TCGCTGCTGC GCTTGCCATG
TCCCTGTCCT CGATCGTTGT CGTTGGAAAC GCGCTGCGCC TAGGTGCAAG GGTTAAGAAG
GGGCCGCGCA CCTTCGGCGC GACCAAGCCA GCCACGGTGA AGATATGA
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| Protein sequence | MSCCSGIAVP ITAGAGDKSA RAEEIRLASR DLGDGLRQTI LTLPDVHCAA CIAAVERALR
KISGVELARV NLSSRRVTIN WRGNDDESSD FAAELAKIGY ASHLASIEED GQDPVLSSLL
KALAVAGFSA MNIMILSVSV WSGADPATRH AFHLISAALA LPAIVYSGRV FYRSAWEALR
HGRTNMDVPI SVGVLLAFAL SVYDTLHNAA YAYFDASTSL LFVLLAGRTL DHLMRGRARS
AVGALERLAP RGANVIRADG AIDYVPLSEI KPGMHLLVAA GERVPVDGVV VKGASELDCS
LVSGESAWKR AEPGSALQAG VMNVGNPLTL LATVSADGSF LAEMTRMMEA AESGRSTYRR
IADRAASLYA PVVHGVALLS MFGWFYGTGD LHKSVTIAIA VLIITCPCAL GLAVPMVQVV
AARRLFERGI MARDGSAFER LNDIDTVLFD KTGTLTLGEM RLVNAGDLQP RLLSLAAAMA
RVSRHPASTA IALAGAGRHT APVEFDSLEE VHGCGIEGRA GDAVYRLGRP SWASNATQVD
LGTSSATVLS KDGETTAVFA FEESVRPGAR ELVQTLRSAG VSVRIFSGDR SAAVSSIAGQ
LEIEAFSAEL LPDEKVEAIR ALAAKGRKVL MIGDGLNDAP ALAAAHVSIA PSSATDVGRS
ASDFVFLGQS LLAVRDIILT AARADVLIRQ NFAMAIAYNV VSVPFAIAGL VTPLAAALAM
SLSSIVVVGN ALRLGARVKK GPRTFGATKP ATVKI
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