Gene Smed_5900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5900 
Symbol 
ID5320202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp864541 
End bp865452 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content64% 
IMG OID640777595 
Productrhodanese domain-containing protein 
Protein accessionYP_001314527 
Protein GI150377932 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0688028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.469982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTG CATCATTGGC ATTCACGCTG ACTGTCCTCG CCTCCTCCGC TCTGGCCGCC 
GAGGTCAAAC CGCTCGTCGA CGCCGAATGG GTCAAGGCGA AGGCCGGCGA CGAAAACGTG
GTTATCCTCG ACATCCGCGA CAAGGTCGCC GAGACCGAGC TGGGCGACAA GCCCTACATC
GAGGGAGCGG TGGTCGCGCC CTATGCGAGC GCCGGCTGGC GCACCGAGGT GGACGGCGTC
CCCGGCATGC TGCCGCCGCT CGAGCAGATC ACCAAGCTGA TCGGCGATCT CGGCATCGAC
AATGACGATC ACGTCGTCAT CATACCCTGG GGCACCGATT CGAGCGAATT CGGAGGCGCG
ACCCGCATCT ATTGGACCTT CAAATATCTC GGTCATGACG AGGTTTCGAT CCTCGATGGC
GGTTGGCGGC AATACGACGC CGCCGGCGGC GCGCGTTCCG CGGAGCCGGC AAAGCCTGAA
CCGGCCACCT TCGCCGCCGA GCCGCAGGAA GAGCTGCTGG CGACGACCGA GGAAGTCGCC
GCGGCGCTCG AAGCCGGCAA AAAGCTCATC GACGGTCGCC CGGCCGAGCA ATACGAGGGC
AAGTCGAAGA GCCCGATCGT GCGCGCCAAC GGCACGATCC CGGGCTCAGC CAATATCGAG
CATTCCAAGC TCTACAGCAA GGACCACGCC CTCTTTGCGC GACCCGAGAC GGTGAAGGCG
CTGACCGAGG CGGTGGGTCT GGCCGCGGAT GAGGAGAACA TCACATTCTG CAACACCGGT
CACTGGGCAT CTGTCACCTG GTTTGCCCTT TCCGAGGTAC TGGGCAACAA GAAGACGAGC
ATGTATGACG GTTCGATGGC CGAATGGACG GCCGACCCGG CGCGTGCGGT CGAGAACAAG
TCGGGCACCT GA
 
Protein sequence
MRLASLAFTL TVLASSALAA EVKPLVDAEW VKAKAGDENV VILDIRDKVA ETELGDKPYI 
EGAVVAPYAS AGWRTEVDGV PGMLPPLEQI TKLIGDLGID NDDHVVIIPW GTDSSEFGGA
TRIYWTFKYL GHDEVSILDG GWRQYDAAGG ARSAEPAKPE PATFAAEPQE ELLATTEEVA
AALEAGKKLI DGRPAEQYEG KSKSPIVRAN GTIPGSANIE HSKLYSKDHA LFARPETVKA
LTEAVGLAAD EENITFCNTG HWASVTWFAL SEVLGNKKTS MYDGSMAEWT ADPARAVENK
SGT