| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5894 |
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| Symbol | |
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| ID | 5320196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 858405 |
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| End bp | 859925 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777589 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001314521 |
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| Protein GI | 150377926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTGA GCGCTGAAAG AACGGTTTCC CTGTGGGCGG CGGTGGAAGT TGCGCCTGAC
GCCGCGCCAC TCACCCGGGA TGAGCAAGTC GATGTCGCGG TTATCGGATC CGGAATCGCC
GGCTTGTCGG TAGCCTACGA ACTCGCGCTC GCGGGCCAGA AAGTGGCCGT CATCGATCGC
GGTCCTATCG GCAGCGGAAT GACGGCCCGC ACGACCGCGC ATCTGACATC GATCTGCGAC
GACTATTTTT CCAAGCTCAT CGAATTGCGA GGGCATGACC TGGCGCGGCT CTTTTACGAG
AGCCAATCGG CCGCAATCGA CCGCATTGAA GCGATCCAAC AGACGGAGCG TGTCGCTTGC
GATTTCAGGC GCGTCGATGG ATTCCTTTTT CCATCATCCG CAACGCAGGA AGCCGACCTC
GAACGCGAAC TCGACGCCGC ACTCCAAATC GGCGTCGCCG TCGAACGAAC CACCGGTCTG
CCCTTTGCGG GGTTTTCCGC CTCCCCCGCT CTGCGCTACG CCGGTCAGGC GACATTCCAC
CCGCTCAAAT ATCTGCGCGC GCTGGCCGTC GCAGTCCGCG CGCGCGGTGG CGCGCTTTTC
GCCGACACCG TGGTGGAAAA GGTCGAGGAA ACCGAGAGCG GGGTCCGCGT TGCAACAACT
TCCGGCTTCG TCGTCACTGG AAAATGGGCG ATCGTTGCTA CAAATTCTCC GATCAACGAC
CGTGTCGCCC TCCATACCAA ACAGGCACCC TACCGAACCT ATGCCATGTC GTTCGAGATC
GCGCGCGGTG TCGTCCCTGA CGCTCTCTAC TGGGATACCG AAGACCCTTA TCACTATGTT
CGCCTGCAAC CCGGCGATGG AGAAACGGAC TCTCTCATCG TCGGCGGTGA AGACCATAAA
ACCGGCGCCG TCGACGATGC CGGCGAGCGC TTTGCGAGGC TGGGCGCCTG GGTCAGAAGC
CTGGTGCCCG ATCTCGGCGC CGAAACGCAC AGATGGTCGG GGCAGGTGAT GGAAACCATC
GACTACACCG GCTTTATCGG GCTCAATCCC GGCAACAACA GAGTGTTCGT CGTTACCGGC
GACTCCGGCG AAGGCATGAC CCACGGTGTG GTTGCCTCTC TTGTGATCCG TGATCTCGTT
CTTAACGGCG ACAGCCCTTG GCGCGAGGCT TATAACCCTT CCCGCAAGAC CGCACGGGCG
TTCCGCGATT ATCTCGTGGA AAACGCGACG GCGATCAAGA ATTTCGCCGA ATATGTCGCG
CCTGGCGAAA TCGATGCGGT GGAAAAGCTG CAGCCGGGTG AAGGTGCCAT CGTCCGCGAA
GGGCTCACCA AAATCGCTGC CTATCGGGAC GAGGATGGCA CACTCTACAA ACGTTCGGCA
TCCTGCACGC ATGTCGGCTG CCACGTGCAC TGGAACTCCC TCGAGCGCTG CTGGGACTGC
CCGTGTCACG GATCGCATTT TGCCTTCGAC GGCACAGCTC TCAACGGGCC GGCTGTGTCT
CCCTTGTCTG ACCTGAAATA G
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| Protein sequence | MNVSAERTVS LWAAVEVAPD AAPLTRDEQV DVAVIGSGIA GLSVAYELAL AGQKVAVIDR
GPIGSGMTAR TTAHLTSICD DYFSKLIELR GHDLARLFYE SQSAAIDRIE AIQQTERVAC
DFRRVDGFLF PSSATQEADL ERELDAALQI GVAVERTTGL PFAGFSASPA LRYAGQATFH
PLKYLRALAV AVRARGGALF ADTVVEKVEE TESGVRVATT SGFVVTGKWA IVATNSPIND
RVALHTKQAP YRTYAMSFEI ARGVVPDALY WDTEDPYHYV RLQPGDGETD SLIVGGEDHK
TGAVDDAGER FARLGAWVRS LVPDLGAETH RWSGQVMETI DYTGFIGLNP GNNRVFVVTG
DSGEGMTHGV VASLVIRDLV LNGDSPWREA YNPSRKTARA FRDYLVENAT AIKNFAEYVA
PGEIDAVEKL QPGEGAIVRE GLTKIAAYRD EDGTLYKRSA SCTHVGCHVH WNSLERCWDC
PCHGSHFAFD GTALNGPAVS PLSDLK
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