| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5891 |
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| Symbol | |
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| ID | 5320193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 856144 |
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| End bp | 857031 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777586 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001314518 |
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| Protein GI | 150377923 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0761198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.505648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTG ACATGAACCT TCTGCCGCTC TTCGTGGCGG TCGCTGAAGA GGATAATTTC
CGTGCTGCCG CAGATAGGCT CGGCGTGACG CGCTCTGCCG TCAGCCAAGG GGTGCGGAGG
CTCGAAGATG CCTTTGGTAC GACGCTCGTC ACCCGCACCA CGCGCTCGGT GCGGCTGACC
GAGGCGGGGG AGCGTCTGCG TGAGGCTCTG TCGCAGCCCC TGTCGGACAT TGCATCGGCA
CTCGATCGTG TGGCGGCCGA GGATGAGCCG CGCGGCCACC TGCGGGTCGC GGTCACCTCG
ATCGCCGAGC GTTTCCTTTC CGGTCCGCTC ATTGCCTCCT TTGCCGAGGC ACATCCGAAG
GTGACGATGG ATGTCACCGT AACGGACGAG GAGTTCGACA TCGTGGCCGC GGGTTTCGAC
GCTGGTGTCA GGCTTGGCGA GGTGATCGAG CAGGACATGA TCGCGGTGCC CTTGACGGGG
GACCAGCGCG AGATGGCCGT TGCTGCCCCA TCCTATCTGG CCGCGCACGG CACACCGCTG
CATCCGCGCG AACTGGTGCA TCATCGCTGC GTCGGATGGC GGCGAGCGCC GAATGTCGCG
CCCTACAGAT GGGAATTCGA AGAAAACGGA ATTCCATTCG ACGTGGCGGT CGAGCCGCAG
ATCACCACCA ATGATCTGCG CTTCATGCTT CGTTCAGCAC TCTGCGGGGC AGGGATCACC
TTCGCAACGG AAGAGACCTT CCGGCCATTC GTGGAGGACG GTCGACTCGT CCCTCTGCTG
GAAGATTTCC TTCCGCCATT CCCCGGATTT TATCTGTACT TCCCTCAGCG CCGCAACATG
GCGCCAAAGA TGCGGGCCTT GATCGAGCAC GTACGACGGT GGCGATAG
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| Protein sequence | MQIDMNLLPL FVAVAEEDNF RAAADRLGVT RSAVSQGVRR LEDAFGTTLV TRTTRSVRLT
EAGERLREAL SQPLSDIASA LDRVAAEDEP RGHLRVAVTS IAERFLSGPL IASFAEAHPK
VTMDVTVTDE EFDIVAAGFD AGVRLGEVIE QDMIAVPLTG DQREMAVAAP SYLAAHGTPL
HPRELVHHRC VGWRRAPNVA PYRWEFEENG IPFDVAVEPQ ITTNDLRFML RSALCGAGIT
FATEETFRPF VEDGRLVPLL EDFLPPFPGF YLYFPQRRNM APKMRALIEH VRRWR
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