| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5889 |
|---|
| Symbol | mtnK |
|---|
| ID | 5320191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 853707 |
|---|
| End bp | 854996 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640777584 |
|---|
| Product | methylthioribose kinase |
|---|
| Protein accession | YP_001314516 |
|---|
| Protein GI | 150377921 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4857] Predicted kinase |
|---|
| TIGRFAM ID | [TIGR01767] 5-methylthioribose kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0199643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.507346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGG AGGACCCTAT GGACAAGCAA GTCTTCGAGG CGCTGAGCGC CGAGACGCTG
CCGCTCCGCA TTGGCGGCAA CGCTGCTCTC AAAGAGAAGA TCGGCGAGAA TTGCGAACGC
TGGACGGTCA ACGAAGTTGG CGACGGCAAC CTCAATCTCG TATTCATCGT CACGGGCGAC
AAGGGTTCTG CGATAATCAA GCAGGCTCTC CCCTATGTGC GCCTCGTCGG TGAGAGCTGG
CCGCTGCCGC TAAAGCGCTC TTTCTTCGAA TATCATGCAC TCGTGCGCCA GGGCGCGCGC
GATCCGGGCA TGGTGCCGGA AATCGTCTTC TTTGACGTTG AGCAGGCCAT CATCGTCATG
GAGTTTCTCA CACCGCACGT CATTCTGCGC CGCGCACTGA TAGAAGGTCG CCGGCTGCCG
AAAATCGGCC GCGACCTCGG GCTCTTCGCC GCCCGCACGC TCTTCCGGGG CTCCGACTTC
TCCATGCCGA CGCGCGAAAA GAAGGCCGAC GTGGCGCTAT TTGCCGACAA TGTCGAACTC
TGCGACATTA CGGAAAACCT GGTCTTCTCC GATCCCTATT TCGAAGCCGA GCTCAATCGC
CACACCGCGC CGCAACTCGA TCCGCTGGTG GCCGAGCTGC GCGCAGACCG CGACCTCAAG
GTCGAGGCGC AACGGTTGAA GCACCTTTTC TCTGCCAAGG CCGAAACACT CTGCCATGGC
GACCTGCATA CCGGTTCGAT CATGGTGACG GACGACGAGA CCCGCATCAT CGATCCGGAG
TTCGCCTTTT ACGGGCCGAT CAGCTTCGAC GTCGGCATGC TCCTCGCCAA TTTCTGGATG
AGCTATTTCT CGCAAAGCGG GCATGAGGCC GAGCGTGGCT CACGTGACGA GGTGCGCTCC
TATCTGCTCG ACACGATTGA GACCATCTGG GAAACTTTCC GCGTCGAATT CTCGAGGCTC
TGGCGCACGG AACGCCGCGG GATCCTCTAC CAGGCAAGCC TCTTCGAAGA CCGTGGCGAC
CCGCTCGCGG CCGAACAGGC ATTAAACATC GTGCTCGACG AAATCTACCG CGAGATGCTG
GGCTTCGCGG GCGTTGAAAT ACACCGCCGC ATTCTCGGCC TCGCTCACAA TGCCGATTTC
GAGATGATCG CCGACCCGGA TCGTCGCGCC AACTGCGAAA GCAAGGCGCT GAAACTCGGC
CGCCATATCG CCGTGAACCG CCACCGTATC CACAGCCTTA GGGACATTCG TGAGACGGCA
GAACGGCTTC AGAAGGAAAC ACTCTCGTGA
|
|---|
| Protein sequence | MQEEDPMDKQ VFEALSAETL PLRIGGNAAL KEKIGENCER WTVNEVGDGN LNLVFIVTGD
KGSAIIKQAL PYVRLVGESW PLPLKRSFFE YHALVRQGAR DPGMVPEIVF FDVEQAIIVM
EFLTPHVILR RALIEGRRLP KIGRDLGLFA ARTLFRGSDF SMPTREKKAD VALFADNVEL
CDITENLVFS DPYFEAELNR HTAPQLDPLV AELRADRDLK VEAQRLKHLF SAKAETLCHG
DLHTGSIMVT DDETRIIDPE FAFYGPISFD VGMLLANFWM SYFSQSGHEA ERGSRDEVRS
YLLDTIETIW ETFRVEFSRL WRTERRGILY QASLFEDRGD PLAAEQALNI VLDEIYREML
GFAGVEIHRR ILGLAHNADF EMIADPDRRA NCESKALKLG RHIAVNRHRI HSLRDIRETA
ERLQKETLS
|
|---|
| |