| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5888 |
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| Symbol | |
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| ID | 5320190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 852060 |
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| End bp | 853616 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777583 |
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| Product | ABC transporter related |
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| Protein accession | YP_001314515 |
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| Protein GI | 150377920 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.342287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.513362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGCT ATCCTAACGT GCTGCCTTGG GAGGAGAACA TGGGCGAACA GGCAGTGTTT
CGCATTGCGG GCGTGCGGAA AACCTTCGGG GCTGTGCCGG TGCTTCAGGG GGTTGATCTC
GCACTCAAGC CGGGTGCAGT CACCATTCTG ATGGGCGCCA ACGGCGCCGG GAAGTCGACG
CTCGTGCGCA TACTGAGTGG CGTGTACCGG CGGGATGCCG GAACGATCAC CCTCGCAGAC
CAACCTTTCG AACCAGCAAC GCCCGCAGGA GCGATCCGGG CCGGCGTCGT GACAGTGCAC
CAGAGCATTG ACGACGGCGT CGTTGCCGAT CTCGACGTCG CGACCAATCT CACTCTCGAC
CGTCTCAACA GAAAGGGCGC GCGGTTCTTC TTCAATCCGC GCCGGGTGCG CCTCGAGGCG
GCGGCGGTCG CCTCCCGCAT GGGGCTCTCG ATAAACCTCG GCGCCGGCAT CAGCGAGCTT
ACACTTGCCG ACCGCCAGAT GGTGGCGATT GCCAGGGCGA TGGCGCATGA GCCCAAGGTA
CTGATCCTTG ACGAGCCGAC ATCGTCTTTA TCCAGCGCCG AGGCCGAGAG GCTGTTCGAG
CTCATCGGTC GGCTGAAGGC GCGGGGCGTG GCCATCCTTT ATATTTCGCA TCGTATGTCG
GATATCCGGC GGCTTGCCGA CAGCATCGTC GCGCTGCGCG ATGGTCGTAT TGCCGGCAGT
TTCGAGGGAC CCGATCTCGA TTATGAAGGC GCCGTCAATG CGATGCTGGG CAAGAAGGTC
TCGTCAGGTT CTGTCAATGT TAGGGAAGCA GGCGCCCCTG TTTTCAAAGC CTGCGGCCTG
AGGCTCTCTG CGCAGTCGCG CCCCATCGAT CTGAGTTTGG GCGACGGCGA GATCGTTGCT
GTCACCGGCC TGGTGGGCGT TGGAAAGACT GCGCTTGCCG AAACCCTTTT CGGCGCGCGT
TCTCCCGCCG CCGGCAAGAT GGTGCTCGAT GGGCAGCCTT ATGCGCCGAA AACGACAGGT
CAGGCTATTG CGCGCGGCGT TTTCCTGGTC GCCAAGGATC GTGCCGAAAG TGGCATCGTC
CCCGATTTCA ACATCTATGA GAATACGAGC CTACCCTTTC TGCGGAGGCT CTCTCGCTTC
AGCGTGTCGA ACCGGCGTGC GGAGCGGGCG AGGGCGAGGG GGCAGATCAC CTCCCTTGGC
GTCGTTTGCC GCAGCGAGCG AGACGAAATG CAAACGCTGT CGGGCGGCAA CCAGCAGAAG
GTGATGGTCG GCCGCTGGCT TTCCGAGCCA TCTCGCGTTC TCATCCTCGA TGAGCCGTTC
CAAGGCGTCG ATATCGCTGC GCGCCGCGAC ATCGGAGCGA AGCTGCGCGC TTCCGCGGTC
GGGCGCTCTA CCATCCTTTT CCTGACCGAG CTGGACGAAG CCTTCGAGGT CGCGGACCGC
ATTCTGGTCA TGTCGGAGCA GACCATCGTC GGCGAACATC GCAACGCCGG CATCGATGTC
GAGCGGCTTC TCTCCGAGAT CGCAGGGCAA AAACACCAAC AGGTCAGCGG ATCATGA
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| Protein sequence | MRRYPNVLPW EENMGEQAVF RIAGVRKTFG AVPVLQGVDL ALKPGAVTIL MGANGAGKST
LVRILSGVYR RDAGTITLAD QPFEPATPAG AIRAGVVTVH QSIDDGVVAD LDVATNLTLD
RLNRKGARFF FNPRRVRLEA AAVASRMGLS INLGAGISEL TLADRQMVAI ARAMAHEPKV
LILDEPTSSL SSAEAERLFE LIGRLKARGV AILYISHRMS DIRRLADSIV ALRDGRIAGS
FEGPDLDYEG AVNAMLGKKV SSGSVNVREA GAPVFKACGL RLSAQSRPID LSLGDGEIVA
VTGLVGVGKT ALAETLFGAR SPAAGKMVLD GQPYAPKTTG QAIARGVFLV AKDRAESGIV
PDFNIYENTS LPFLRRLSRF SVSNRRAERA RARGQITSLG VVCRSERDEM QTLSGGNQQK
VMVGRWLSEP SRVLILDEPF QGVDIAARRD IGAKLRASAV GRSTILFLTE LDEAFEVADR
ILVMSEQTIV GEHRNAGIDV ERLLSEIAGQ KHQQVSGS
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