| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5887 |
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| Symbol | |
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| ID | 5320189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 851017 |
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| End bp | 852063 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777582 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001314514 |
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| Protein GI | 150377919 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0742654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.67986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTG AACAGAGCAA ACCGGCGGCG AGCCAGGCGA TTCCGTCGTC AGCTGGCGTG
CGGGAAGCAG CGATAAGATA CGGCTTTCTC GTGCTTTTGG CCGGGATGAT CCTCTATTTC
TCATTGGTCA CCGGTGGATT CGCCTCTCCG CAAAGCGCAG TTTTCATTCT GCAATCGGTC
TCGATCACAG GCATCCTCGC GCTCGGCGTA ACGGCGACCC TGGTCGTCGG CGGCTTCGAC
CTGTCGATAG GCTCCATCGC CACGACGGCG ATGATGGCCT CGTCCTACGT CATGGTCGTG
CTGGGTGGGG ATGCTTTGAC GGCGACCCTC GTGTGCTTCT CGATCGGGGT TCTCATCGGG
CTGATCAATG GCATCATTAT CGTCTACATG CGCGTGCCCG ACCTGCTCGC GACGCTCGGC
ATGATGTTCC TGCTGCTCGG CCTTCAGCGC ATCCCGACAG AGGGACGCTC GATCGCCGCC
GGCATGACCC TGCCCGACGG CACCGTTGCG CCCGGCACTT TCAGCCCTGC CTTTCTGGCG
CTCGGGCGTC ATCGCTTCGA TTTCGTCCTG CCAAATCTCG TGCCGGTCTC TGTCGTGGTC
CTGATTATTC TTGCGGTCGT TATCTGGTTC TTCCTCGAAT ATACGCGCTT CGGCCGGATG
ATGTACGCCG TGGGCTCGAA CGAACGTGCC GCCAGCCTCG CGGGCGCGCC GGTCAATGCT
TACAAAATCT GGGCCTATAT CATTTCCGGC GTCTTTGCCT CGATCGGCGG TATCCTGCTC
GCGGCCCGCC TCGGCCGCGG GGATATCGCC TCCGGCAACA ACCTGCTGCT GGACGCCGTC
GCCGCTGCGC TGATCGGTTT CGCCGTACTC GGTGCCACTA AGCCGAACGC CTTCGGCACG
GCCGTCGGCG CGCTCTTCGT CGGCATCCTG CTGCAGGGCC TGACGATGAT GAACGCGCCC
TACTACACCC AGGATTTCGT CAAGGGCGCG GTGCTGGTCA TTGCCCTGAT TTTCACCTTT
GCGCTCTCGA AAAGAGGCAG ACGCTGA
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| Protein sequence | MSIEQSKPAA SQAIPSSAGV REAAIRYGFL VLLAGMILYF SLVTGGFASP QSAVFILQSV
SITGILALGV TATLVVGGFD LSIGSIATTA MMASSYVMVV LGGDALTATL VCFSIGVLIG
LINGIIIVYM RVPDLLATLG MMFLLLGLQR IPTEGRSIAA GMTLPDGTVA PGTFSPAFLA
LGRHRFDFVL PNLVPVSVVV LIILAVVIWF FLEYTRFGRM MYAVGSNERA ASLAGAPVNA
YKIWAYIISG VFASIGGILL AARLGRGDIA SGNNLLLDAV AAALIGFAVL GATKPNAFGT
AVGALFVGIL LQGLTMMNAP YYTQDFVKGA VLVIALIFTF ALSKRGRR
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