| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5885 |
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| Symbol | |
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| ID | 5320187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 848915 |
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| End bp | 849895 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777580 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001314512 |
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| Protein GI | 150377917 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.873951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCC GCGTCAACGA CCAGATCATT CACAAGGCCG CCTGGCTTTA CTATACGCAC
GGCCTTCGCC AGGACGAAGT TGCCCGGAGG CTGGAAATCT CGCGTGCTTC CATCGCCATG
TATCTGCGGC GCGCCCGGGA GATGGGTATC GTCACGATCA CCACCTCATC GGAACTCTTC
TCCAGTGACG TTCTCGCCCG GGAACTCGAA GACGCCACGG GACTGACGAC CGCTTGGATC
GTCCCGGAAG ATCGGCAAGC GATGAACCCG GCTGCGGAGG TTCCGGAGGT CGCAGCCTCG
GTCTTTCTGG AGCTGATCAA CAAGGGCGAC CGAATTGGGG TGGCATGGGG CCGCACCGTA
TATCATATCG CCGACGTCAT GCCCTTCGCA GACCTCAAGG GCGTCACCGT CGTGCAGCTT
TGCGGCAATC TGGGCGCACC CTATTCCTAC CGCCCCGATC AGTGCACCAC CGAAATTGCG
CGTCGCCTCA ACGCCGAGGG CGTCAATATC TACGCACCCC TCGTTCTCTC TTCAGAGCGG
CTTGCTGAGG AACTGCGCGC CGAGCCGGTC ATTCGGGAGC AGCTCGCAAC CATTTCCGAC
TGCCGGCTTT CGCTCTACTC CGTCGGAGGA ATCGAGGACG ACAGCCATCT CGTCAAATGC
GGCGCCCTTT CGGCCGACGA GATGCATGCC ATGGGCGAGA GGGGCGCGGC CGGAGTGATC
GCCGGGCAGA TCATCGATCA CAACGGTCAA TGGATGGATT GCGCGCACAA TCGGCGCTGC
ATCTCCGCCG ATCTCAATTC CATCCGCGCG ATCAGGAAGC GCATGCTCGT CGTGCAGGAG
GAAAACAAGT TTGAACCCCT GTTGGCCGCT CTGAAGGGAG GCTTCGCCTC GCACCTCGTC
GTCACCGCTT CGATGGCGCG GCGGATCATG GATCGCTGGA GCCGAGACGG GCTTGGCAGG
AGTGCCCCTG CCAAGCCCTA G
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| Protein sequence | MPIRVNDQII HKAAWLYYTH GLRQDEVARR LEISRASIAM YLRRAREMGI VTITTSSELF
SSDVLARELE DATGLTTAWI VPEDRQAMNP AAEVPEVAAS VFLELINKGD RIGVAWGRTV
YHIADVMPFA DLKGVTVVQL CGNLGAPYSY RPDQCTTEIA RRLNAEGVNI YAPLVLSSER
LAEELRAEPV IREQLATISD CRLSLYSVGG IEDDSHLVKC GALSADEMHA MGERGAAGVI
AGQIIDHNGQ WMDCAHNRRC ISADLNSIRA IRKRMLVVQE ENKFEPLLAA LKGGFASHLV
VTASMARRIM DRWSRDGLGR SAPAKP
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