| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5882 |
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| Symbol | |
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| ID | 5320184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 845745 |
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| End bp | 846581 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777577 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001314509 |
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| Protein GI | 150377914 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTC TCGAAGCGAT CAATTTACCC TTTACGGGAC TGCGAGCAGC GATCCTGGCG
GCCGTCCTGA CTTTTGCGGC AGGCGCCGCA GTGCCGGCTG CCGCAGAGGA CAATCCGCTC
GGCCTGATTG ATCCGGCCAC CGTCAGCGTC GGCACGATGG GTGATGCCAA GCCCTATGCC
TTTACCACCT CGGACGGCAA TTTCACGGGT TTCGATATCG AGCTCTTCCT CAATGTCGCA
GAGCGCATCG GCTTCAAGAA GGATCAGGTG ATCTTCACCG GTCAGGAGTT CGCCGCGCTG
ATGCCGTCGG TCGCCAACAG CCGCTTCGAT GTCGCGGCAG CAGCGATCGG CACCACGGAG
AAGCGCAAGG AGACAGTCGA TTTCTCCGAC GGCTATATTG CAGGCTACCT CTCCGTACTG
ACGGCGGATG CCTCCATCAC CGATGCTGCC GGCTTGAAGG GCAAGCGGCT CGGAGTCGTG
CAGGGCACGC TCCAGGAAAT CTATGCCGAG AAGAATTTTA CCGGGGCCGA TCTCGTCAAA
TTCCCGGACA ACAACTCTGC CGTGGCGGCG CTCAACAACG CCACCGTAAA TGCGCATTTC
CTCGACTACG AGGCGGCGAA GGACTATTCG AGCCGCTATC CGGAGCTGAA GATTGCCATC
AATATTCCAA GTTTCGATGC ACCGGCCGGC TTCGTCGTCC GGAAGGGCAA CGATGCACTG
CGGGAGGCGC TGAACAAGGC GCTGCACGCC GCCATGCAGG ACGGCACCTG GAAAACGCTG
CACGAAAAGT GGTTCCCGGG AACGCCGATG CCTGAAGCAT ATCTTCCGAA GCCTTGA
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| Protein sequence | MEFLEAINLP FTGLRAAILA AVLTFAAGAA VPAAAEDNPL GLIDPATVSV GTMGDAKPYA
FTTSDGNFTG FDIELFLNVA ERIGFKKDQV IFTGQEFAAL MPSVANSRFD VAAAAIGTTE
KRKETVDFSD GYIAGYLSVL TADASITDAA GLKGKRLGVV QGTLQEIYAE KNFTGADLVK
FPDNNSAVAA LNNATVNAHF LDYEAAKDYS SRYPELKIAI NIPSFDAPAG FVVRKGNDAL
REALNKALHA AMQDGTWKTL HEKWFPGTPM PEAYLPKP
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