| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5880 |
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| Symbol | |
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| ID | 5320182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 842876 |
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| End bp | 844006 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640777575 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001314507 |
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| Protein GI | 150377912 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0408226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACA ACACAATCAC CTCGGCGGTT ATCGTCGGCG CAGGCATTTT CGGCGTATCC
ACGGGCGTGC AGCTCGCTCG GCGCGGCATC CGCGTGATCA TGCTGAACGA AGGGCCACCT
GCCGGGGGCG CTTCCGGTCG ATCGCTATCC TGGCTGAATT CCTCCCGAAT GCGCTCCGAG
CCCTATCATC GCTTGCGCAT GGCCGGCATA GATCGCTATC GCACACTTTC GGCTCGCTTT
CCCGATGCGG ATTGGCTTCG CTTCGAAGGC GGCCTGACCT GGGATGCCGA TGACGCAAGT
AACGGCATCG ATGCAGCTTA TCGCCACGAA GTATCACTCG GCTACGATGC GAGACATCTT
TCCGCAGGCG AGGTTGCGGC GATCACGCCT GGCGTCGATA CGAGCACGAT TACGCCTCAG
GGCGCCATCT TCAATCCGGG CGAAGGGTGG GTCGATCTGC CAAGCCTGAT CGGCCTGCTC
CTAAAGGAAT TTGCCGCTCT CGGAGGAACC CTCGTGACCG ATCAGGGTGC AGCAAAAATC
GTGGTGGAAG GCGGCAGGGC CGTCGGCGCC GAGACTGCGG CAGGCAATAG CTTTACGGCC
GATGCCGTCG TGCTCGCCAC CGGCCCGGCG GTGCCGAAGA TGGTGGCCGA GGCCGGAGAG
ACCATCGGCG ATGCAACCCC CGTCGCCCTT CTGGTCCAGA CGAAACCGCT CGCCCATCCG
CTGCGCGCCG TCTTGAACAC GCCGCGCGTC GCCGTGCGGC CGGCGCCGGG CGGCACCTTC
TCACTGGACG CAGACTGGGC GGCGGACGAA GGCTTGAGGT TGCGCGAGGA CGGCGGCCAC
GACATCGACC GAACCATCGT AGAGGCGCTA CTCGCGGAGG CTTCCAAGGT GATGGAGGGC
AATCCGAAGC TGAAGATCGC ATCGATCGGC GTCGGCAGCA AACCCATCCC TGGTGACGGC
GAACCGGTGG TGGGCGCGCT CAGGGCCATT CCCGGCTACC ATGTCGCCTT CAGCCACAGT
GGCGCGACCC TCGGCCTGAT CATCGGCGAA CTTCTCGCGC ACGAGGTCGC AACCGGTTCG
GAGCACCCGA TGCTTGCCAC GTTCCGCCCC GAGCGCTTCG CGTCACGGTG A
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| Protein sequence | MKDNTITSAV IVGAGIFGVS TGVQLARRGI RVIMLNEGPP AGGASGRSLS WLNSSRMRSE
PYHRLRMAGI DRYRTLSARF PDADWLRFEG GLTWDADDAS NGIDAAYRHE VSLGYDARHL
SAGEVAAITP GVDTSTITPQ GAIFNPGEGW VDLPSLIGLL LKEFAALGGT LVTDQGAAKI
VVEGGRAVGA ETAAGNSFTA DAVVLATGPA VPKMVAEAGE TIGDATPVAL LVQTKPLAHP
LRAVLNTPRV AVRPAPGGTF SLDADWAADE GLRLREDGGH DIDRTIVEAL LAEASKVMEG
NPKLKIASIG VGSKPIPGDG EPVVGALRAI PGYHVAFSHS GATLGLIIGE LLAHEVATGS
EHPMLATFRP ERFASR
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