| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5876 |
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| Symbol | |
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| ID | 5320178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 839309 |
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| End bp | 840229 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777571 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001314503 |
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| Protein GI | 150377908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.585609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTTT TCATTGCCAT TTTCACCGGC ACCATTATCG CCGCGACGCC ATTGATTTTC
GCATCCCTCG GGGAGCTCGT CGTCGAAAAA TCCGGCGTAC TCAACCTCGG CCTGGAGGGA
ATGATGCTGA TGGGAGCGGC TTTTGCCTTT TGGGCGGTGA TCTCCGGCCT CCCCATGCCG
GTAGCCATTG CGGCCGGCGC ACTCGCCGGC GCCGCCACCT CGCTTCTCTT CGGCGTTCTG
GCGCTGACTT TTCTGACCAA CCAGTATGCA GCCGGCCTGG CGCTCGCCAT ATTCGGATCG
GGGGTCTCGG CGTTCCTCGG GCGCGGTTTC GGCAGCACGC CGATCGATGC GCTCAAACGC
ATCCATATAC CCCTGCTGTC CGATATCCCT GTGGTCGGGC CGCTGTTCTT CCGCTTCGAC
CCGATGGTCT ACCTGGCGAT CGCTATATTC GGGCTCATCA CCTGGTTCCT TTACCGGACC
AAAGGCGGCC TCATTCTCCG CACCATCGGC GAATCGCCCG AGACGTCACA CGCGATCGGT
TATCCGGTCA CCAGGATCCG ATATATGGCG GTGCTTTTCG GTGGGCTGAT GGCCGGCCTG
GCCGGCGCAT ATCTGTCGGT CGCCTACACC CCACTCTGGG TGGAGAACAT GACGGCCGGT
AAGGGCTGGA TTTCGCTGGC ACTCGTCGTT TTTGCGACAT GGCGGCCGCT GCGCGTCCTG
ATCGGCGCCT GGTTGTTCGG CGGCATGACG ATCCTGCAGC TACAAGGGCA GGCTCTCGGC
ATAGCAGTCC CGTCAGAGCT CCTCTCCGCC CTTCCCTACC TCGCAACGAT CATCGTTCTG
GTGATCATTT CGCAAAATCG CCAGATGCTG GCACTGCACT TTCCGGCCTC GCTGGCAAAG
CCATTTCGCG CAGCGAGCTG A
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| Protein sequence | MDLFIAIFTG TIIAATPLIF ASLGELVVEK SGVLNLGLEG MMLMGAAFAF WAVISGLPMP
VAIAAGALAG AATSLLFGVL ALTFLTNQYA AGLALAIFGS GVSAFLGRGF GSTPIDALKR
IHIPLLSDIP VVGPLFFRFD PMVYLAIAIF GLITWFLYRT KGGLILRTIG ESPETSHAIG
YPVTRIRYMA VLFGGLMAGL AGAYLSVAYT PLWVENMTAG KGWISLALVV FATWRPLRVL
IGAWLFGGMT ILQLQGQALG IAVPSELLSA LPYLATIIVL VIISQNRQML ALHFPASLAK
PFRAAS
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