| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5873 |
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| Symbol | |
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| ID | 5320175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 835540 |
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| End bp | 836634 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777568 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_001314500 |
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| Protein GI | 150377905 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAC TGACCAGACG ACAATTTCTT CGATATTCCG GCGCCACCGG TGTGGCACTC
AGCACCGGCG GCCTTGCGCA GGCTGCCAGC GCCGAAGACC CTCTTAAGAT CGGCGTTGTC
TATGTGTCGC CAATCGCGGA AATCGGTTGG ACAAAACAGC ACAGCCTCGG GGTAGATGCG
ATCAAGAACG AGTTCGGCGA CAAAGTCGCC ATTACCGTCC TCGACAACAT CTTCATGCCG
CAGGATGCCG AGCGGGTGTT CCGCGAGCTT GCTGCCTCCG GCAATCAACT AATCTTCGGC
ACCAGCTTCT CGCATGGCAC GCCGCTGCAG AAAGTGGCGC CGCGCTTCCC CAAAACTGCG
TTCGAGCACT GTTCGGGCAT TGTGCACCTC GCAAATCTCG GCACCTTCGA AGCCAAATAT
TACGAGGGCA CTTTCGTCGC AGGTGCTGCC GGCGCGCATA TGAGCAAGTC CGGCAAAATC
GGTTTCATCG GCGGCTTCCC AATTCCCGAC ATTGTCGGGC CGGCGAACGC GCTGCTGCTT
GGCGCCCAGA GCGTCAATCC GGAGATCACT TGCAATGCCA TTTTTCTCAA TTCCTGGTTC
GATCCGGGAA AGGAGAAGGA AGCGGCCAAT ACTCTGCTGT CGCAAGGATG TGACGTCATC
TGCTCCATGA CCGATACGGC AACCGGCGTG CAGGTCGCCG GCGAAGGCGG CGCCTGGTCG
ATCGGCTATG CTAGCGATAT GGCCAAGTTC GGCTCCGGCA AGCACCTCAC AGCCTTCGTC
CTTGACTGGT CCACCAATTA CGTCCGCGCG GCGAAGGGGG TGGCGGAAGG GAACTGGAAA
GCCGAGGCAC GCTGGGATGG CTTGGCCGCC GGCGTGGTCA AGATGGCGCC GTATAACGAG
GCGATCCCCG CCGATGTCCA AGGCAAGCTC AAGCAGCTCG AGGCCGACAT CGGTGCCGGC
AAACTCCATC CCTATGCCGG CGAATTGAAG GACCAGGACG GCAACGTGAA AGTGGCGGCA
GGGTCTGTCC TCTCCGATAC GGATATTCGG GGCATGAACT GGTTCGTCAG GGGAATGATC
GGCAAGCTCG GCTGA
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| Protein sequence | MFRLTRRQFL RYSGATGVAL STGGLAQAAS AEDPLKIGVV YVSPIAEIGW TKQHSLGVDA
IKNEFGDKVA ITVLDNIFMP QDAERVFREL AASGNQLIFG TSFSHGTPLQ KVAPRFPKTA
FEHCSGIVHL ANLGTFEAKY YEGTFVAGAA GAHMSKSGKI GFIGGFPIPD IVGPANALLL
GAQSVNPEIT CNAIFLNSWF DPGKEKEAAN TLLSQGCDVI CSMTDTATGV QVAGEGGAWS
IGYASDMAKF GSGKHLTAFV LDWSTNYVRA AKGVAEGNWK AEARWDGLAA GVVKMAPYNE
AIPADVQGKL KQLEADIGAG KLHPYAGELK DQDGNVKVAA GSVLSDTDIR GMNWFVRGMI
GKLG
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