Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5856 |
Symbol | |
ID | 5320158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 817766 |
End bp | 818962 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640777551 |
Product | hypothetical protein |
Protein accession | YP_001314483 |
Protein GI | 150377888 |
COG category | [S] Function unknown |
COG ID | [COG5441] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.973654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGCA TCTACATCGT AGGCACGGCC GACACGAAGG GGGAGGAACT CACTTATCTG GCGGCGCGGG TCGAGGCCGC CGGCGGCCGG CCCGTTCGCG TCGATGTCGG CACGCGTCGC CCCACGGTTG CGGTGGACAT CTCAGCCGAG ACAGTGGCGG CCGCGCATCC TGACGGCGTT GCAGCAGTGC TTTCCGGCGA TGACCGGGGG AAGGCGGTCG CTGCAATGGG TGAGGCCTTC GCGCGCTTCC TTCCTAAATG CGACGATGTC GCCGGCGTGG TAGGCATTGG TGGTGGGGGC GGCACATTAA TCATCACTGC GGGCATGCGC GGATTGCCAC TCGGTCTGCC GAAGCTCATG GTCTCGACGC TCGCGTCCGG CGACGTAGCA CCTTACGTTG ACGTTTCCGA CATTGTCATG ATGCCATCGG TCACAGACAT GGCCGGGCTC AACCGCATCA GCCGCGTGAT CTTGCAAAAC GCGGCGGCGG CAATTACGGC AATGGCCAGT CGGCCAACTG AGAAAGCAGC CTCCAAGCCC GCTCTCGGTC TTACTATGTT TGGCGTGACG ACTCCCTGCG TGACCACCAT TGTCGACAGA CTGAGGGCGG ATCACGATTG TCTGGTCTTC CACGCCACTG GCGCAGGCGG ACGCACGATG GAGAAGCTCG CAGATAGCGG GTTTCTTTCA GGCGTGCTCG ACATTACCAC GACAGAGGTT TGCGACTTTC TCCTTGGTGG CGTCCTTTCG GCAACGCAGG ATCGCTTCGG TGCGATTGCG CGCACGGGAC TGCCTTATGT CGGCTCCGTC GGTGCGTTGG ATATGGTGAA TTTCTGGGCG CCCGAAACCG TGCCGGAGCG CTACGCGGGG CGACTTCTCT ATCACCATAA TCCCAACGTC ACGCTCATGC GTACGACTCC GAGGGAGTGC GCTGCCATCG GAAGATGGAT TGGGGCCAAG CTCAACCTCT GCAAAGGTGT CGTTCGCTTC CTTATTCCGG AGAAGGGCGT GTCGGCCCTC GATGTCGAGG GGGGAGCCTT TTTCGATCCG ACAGCAGACG CGGCCCTTTT CGAGGCGCTG GAAGCGACTG TCGACAGGAC CGAGCGCCGC CGTATCGTCC GTCTTCCGCT TCACATCAAC GATCCGCAGT TTGCCGAGGC CGCAGTCGCG GCCTACCGAG AAATCGCAAA ACATTGA
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Protein sequence | MQRIYIVGTA DTKGEELTYL AARVEAAGGR PVRVDVGTRR PTVAVDISAE TVAAAHPDGV AAVLSGDDRG KAVAAMGEAF ARFLPKCDDV AGVVGIGGGG GTLIITAGMR GLPLGLPKLM VSTLASGDVA PYVDVSDIVM MPSVTDMAGL NRISRVILQN AAAAITAMAS RPTEKAASKP ALGLTMFGVT TPCVTTIVDR LRADHDCLVF HATGAGGRTM EKLADSGFLS GVLDITTTEV CDFLLGGVLS ATQDRFGAIA RTGLPYVGSV GALDMVNFWA PETVPERYAG RLLYHHNPNV TLMRTTPREC AAIGRWIGAK LNLCKGVVRF LIPEKGVSAL DVEGGAFFDP TADAALFEAL EATVDRTERR RIVRLPLHIN DPQFAEAAVA AYREIAKH
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