| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5792 |
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| Symbol | |
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| ID | 5320094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 763791 |
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| End bp | 764741 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777497 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314429 |
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| Protein GI | 150377834 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.026366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000411761 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACCC AGACTTCCCG AACTCCGCCG ATCACGCGTC CCTCGCTTCT CCAGCGCATC
CGCAAAAGCG ATCTGTGGTG GTCGTTCACG CACAGCAAGA CCGCGATGTT CAGCGCCGCG
CTCCTGGGGA TCCTGATCCT GACCGCCCTC TTCGCCCCGC TGATCGCGCC GCAGAATCCC
TATGACGGGG CAGCGCTCGA CATGTGGAAG GCGGAACTGC CGCCCCTATG GGAAGAAGGC
GGCGAATGGC CTTTTCTTCT CGGCACCGAC ACGCAAGGGC GAGACATGCT GTCTGCCATT
CTCTATGGGA CGCGCATCTC TATCATCATC GGTATAGCCT CGGTCGCGCT CTCCCTCCTG
ATCGGCATGA GCGCGGGGCT GATCTCCGGC TTCTTCGGCG GCTTCATCGA CAATCTGCTG
ATGCGCATCG GCGACATCAC TCTCTCCATT CCGACCATTC TCGTCGCCAT TCTCGTCTCG
ACCGTCGTGC GTCAGATGCT GCCCGTCAGC CTGCGTGAGG TTGGCGCGTC GGCGGTGCTC
ATCCTGGCCA TCGCGCTATC GGCATGGGTG CAATATGCCC GAACGGTGCG CGCGCAGGCC
ATTGTCGAAA CCGGCAAGGA CTACGTTTCG GCAGCGCGGC TGATCGGCGT GCCTGCCCGG
CGCATCATGG CCAGTCACAT CCTGCCCAAT ACGTTGACGC CGATCATGGT AGCGGCCACC
CTCAACTTCG GCATGGCGAT CCTCACGGAA GCCACGCTTT CGTTCCTTGG CATCGGCATG
CCACCGAGCC AGCCGTCTCT GGGAACGCTG ATCCGCATCG GCAACCAGTT CCTGTTCTCG
GGTTCCTGGT GGATCGTCCT CTTCCCCGTC CTGCAGCTCT GCATGCTGGT CGTGGCCGTC
AACATGCTCG GCGACTGGCT GCGCGATGCT CTCAATCCGA AACTGAGGTA A
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| Protein sequence | MSTQTSRTPP ITRPSLLQRI RKSDLWWSFT HSKTAMFSAA LLGILILTAL FAPLIAPQNP
YDGAALDMWK AELPPLWEEG GEWPFLLGTD TQGRDMLSAI LYGTRISIII GIASVALSLL
IGMSAGLISG FFGGFIDNLL MRIGDITLSI PTILVAILVS TVVRQMLPVS LREVGASAVL
ILAIALSAWV QYARTVRAQA IVETGKDYVS AARLIGVPAR RIMASHILPN TLTPIMVAAT
LNFGMAILTE ATLSFLGIGM PPSQPSLGTL IRIGNQFLFS GSWWIVLFPV LQLCMLVVAV
NMLGDWLRDA LNPKLR
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