Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5778 |
Symbol | |
ID | 5320080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 751585 |
End bp | 752115 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640777485 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001314417 |
Protein GI | 150377822 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.225657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0101092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGGTCG ATGTGTCGAT TGAAGAAGGG TCGATAATCA GGCGGTTATC AGTCGATGAC ATCGACGTTT TTCGCCGCAT ACGTCTGGAG GCGCTTTCAC ACGAACCCTT TTCGTTTGCG AGCGTATTTG GTGATTGGGT CCATCTCTCC GACCGCGAAT GGCGCCAGCA TCTGGATCAG CCAGTGTTTG TCGCGTTCCT GAGTGGGCAG CCCGTTGGCA TGATGGGGCT CAGGTTTGAG CGTGCGAGGA AGATGGCGCA TCGCACGAGG CTTGTCAGCG TCTATGTGCG GAAAGACAAT CGAAGGACCG GGATCGCGGC AAAGCTTTTG CATGACGTTA CGGAGCATGC ACGAGACCGC GGAGTTCTGC AGGTGGAGCT TGCGGTGAGT GCGGACAATT CGGCCGCGAT ACGGTTCTAT CAACGCCACG GTTTCGTAGA GGTTGGCCGC ATCCCAAACG GCTTCCTGGG CCACGGCACC GAGAACGACG AGTTGATCAT GGTACTGCGC TTGGCTCGCG AGAGGGGATG A
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Protein sequence | MEVDVSIEEG SIIRRLSVDD IDVFRRIRLE ALSHEPFSFA SVFGDWVHLS DREWRQHLDQ PVFVAFLSGQ PVGMMGLRFE RARKMAHRTR LVSVYVRKDN RRTGIAAKLL HDVTEHARDR GVLQVELAVS ADNSAAIRFY QRHGFVEVGR IPNGFLGHGT ENDELIMVLR LARERG
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