Gene Smed_5766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5766 
Symbol 
ID5320068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp732432 
End bp732908 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content60% 
IMG OID640777474 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001314406 
Protein GI150377811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACGG CCGCCGCGCT CACCGACCCT ATTACGCCAC CGATCATAGC CGTTCCACTA 
AGCAAACTGC CGTCGTTTGG AGCAAAAAAA TCTCTGTCCA GCGACTATCG ACGCATCGAG
GTGATCACGG GAAGTGTCCG CGCCGGCGTG GACCGAGAAA ACCTGCAGAT CATCGAGCGG
AGTTTCGAAG CTGGCGAGAC GGTGTCCTCG ACCGCTCGCC GTCACGGTGC TACGCCCAAC
CTCCTTTATC GATGGCGCAG GCTCTTGAGC ACGGGAGGCG CTGCTGCCGT GGATTCAGAC
GAGCCGGTCG TCGGCAATTC GCAAGTGAAG AAGCTGGAAG GCCGCGGTCG CGAACTGGAG
CGCATGCTCG GCCGTAAGAC GATGGAGGTC GACATCCGCC GTGAGGCCCT GTCCAAAGCT
AGCTCAAAAA AACAGATGTC GCGGCCGATC TTGTTGCCGA AGGACGGTTC CCGATGA
 
Protein sequence
MITAAALTDP ITPPIIAVPL SKLPSFGAKK SLSSDYRRIE VITGSVRAGV DRENLQIIER 
SFEAGETVSS TARRHGATPN LLYRWRRLLS TGGAAAVDSD EPVVGNSQVK KLEGRGRELE
RMLGRKTMEV DIRREALSKA SSKKQMSRPI LLPKDGSR