Gene Smed_5761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5761 
Symbol 
ID5320063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp727764 
End bp728900 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content61% 
IMG OID640777470 
Productalpha/beta hydrolase fold 
Protein accessionYP_001314402 
Protein GI150377807 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGA GCACACGCTA TGCAAGAAGT GACGGATTGA ACATTGCCTA TCAGACAGTC 
GGCGACGGTC TGCTCGATAT CATCTATGTG CCGGGCTGGG TATCGAATCT GGACTATGCC
TGGATCTTTC CTCCTTTGGC ACATGTGTTT GAGCGGCTGA GCGCGTTTTC GCGGTTGATC
CTTTTCGACA AGCGCGGCAC GGGTCTGTCC GACCGCAATG TCGGGTTTCC GACGCTGGAA
GAACGAATGC GGGACATGCA GGCTGTCTTG GATGCTGCAG GTTCTCGCCG GGCGGCTCTG
ATGGGCACCT CCGAAGGCGG CAATATGTGC ATGCTGTTCG CGGCCACCTA CCCGGAGAAG
ACTGCCGCAC TCGTGCTCAA TGGATCTTTC GCTAAGGGCC TTTGGGCGGA GGATTACCCA
TGGGCGAAGA CCCGAGAGCA GGTCGAGGAA GAACTCGAGG CCATCGCTCG GGACTGGGGC
GGGGCATTTG ACCTCGGCAA CGCCGCGCCG AGCCACGCCA ACGACCGCGA GGCGCGCGAA
TGGCTTGCCG GTTACTTGCG CAATTCGGCC TCGCCACAGG ATGCCATCTC ACTCTGGCGC
TGGAACACCG AGATCGATGT TCGGGGCATC CTCAGTGCTA TCCATGTTCC CACACTCGTC
CTGCATCGTA CCGGCGATCG GTGGGTGAAT GTCGAGGAGG GCCGCTACGT CGCCCATCAC
ATACCGGGAG CAAAATGGGT GGAGTTGCCG GGCGACGATC ACGTGATCTG GGCCGGCGAT
GCCGATCGCA CTCTGGACGA GATAGAGGAG TTCCTGACCG GAATACGACC GCAACCCGCT
TCGGAACGTA TCCTCCTCAC CGTGATGTTC ACCGACATCG TCGGCTCGAC CTCCGTTGCG
GCCGAACTCG GTGATCGCGG TTGGCAAGAG CTGGTGCACC GTCACGATGA GGCGGTGCGT
GCTGAACTCG GTCGCTTCGG CGGCAGTGAA ATAAAGACGA TGGGAGATGG ATTCCTGGCA
ATCTTCCACG GACCGAGCAA GGCAATCCAT TGCGCTTGCG CGATACGCCG TCGGGCGGCC
GACATCGGGC GTCCGTGCCG CGCTTCACAC CGGGGAATGC GCAAAGCGTC GAAATGA
 
Protein sequence
MQPSTRYARS DGLNIAYQTV GDGLLDIIYV PGWVSNLDYA WIFPPLAHVF ERLSAFSRLI 
LFDKRGTGLS DRNVGFPTLE ERMRDMQAVL DAAGSRRAAL MGTSEGGNMC MLFAATYPEK
TAALVLNGSF AKGLWAEDYP WAKTREQVEE ELEAIARDWG GAFDLGNAAP SHANDREARE
WLAGYLRNSA SPQDAISLWR WNTEIDVRGI LSAIHVPTLV LHRTGDRWVN VEEGRYVAHH
IPGAKWVELP GDDHVIWAGD ADRTLDEIEE FLTGIRPQPA SERILLTVMF TDIVGSTSVA
AELGDRGWQE LVHRHDEAVR AELGRFGGSE IKTMGDGFLA IFHGPSKAIH CACAIRRRAA
DIGRPCRASH RGMRKASK