| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5729 |
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| Symbol | |
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| ID | 5320031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 698757 |
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| End bp | 700283 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777447 |
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| Product | transcriptional regulator domain-containing protein |
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| Protein accession | YP_001314379 |
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| Protein GI | 150377784 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5616] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.816557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGAAC CGCTATATAC TTTCGGCGAC TTCGTGCTGG ATCCCCGCAG CGGGCTACTG
CGGCGGAAGG GAGAGTCGGT GGAAATCGGC TCCCGCGGTC TCGCGCTTCT CCAAGCATTG
CTGGAAGCCA GGGGCGGGAT CGTATCCAAG GCCGAACTGA TCGAACGAGG TTGGCCGAAC
ACGATTGTCG AGGACAGCAA CCTTACCGTA CAGATCGCAA GTTTGCGAAA GGCGCTTGGA
CCGTCTCCCG ACGGGCGTGA GTGGATCACG ACAATACCTC GGGCTGGCTA TCGCCTAGTC
ACGGCTTATG CGGGAGCTTC CAGTCTGACG TCAACCAGGC CCGCACTGGC GGTTCTGCCA
TTTATCAATC TTGATGGCGG TTCTGACCAG GGTTATTTCG CGGACGGCGT TGTCAATGAG
ATCATCACCG CGCTCAGCCG CTTCAGAAGC TTCGCCGTGG TCGCGCGCAA CGGATCCTTT
TTCAACAATT TGCGATTTCC TGACGTACGA TTGGTCGCCA AGGAACTCGG TGTCGGCTAT
ATGCTCCAAG GCAACATAAG GCGTCCGGGC AGCCGATTGA GAATCTCGGT ACAGCTCGTT
GACGGCAGTG GCACACATCT CTGGGCGCAT AGCTTCGATG AGGAACTTGA TGATGTGTCC
GTTTTCCAGG ACCGAATAGC CGAGAGCGTC GTGTCACTGG TTGAGCCGCA TATTCAAGCG
GCCGAGATCG AACGCTCACG TCGAGACCGG CCGGGGAGCA CTGCCTCTTA CGATATCTAT
CTGCAAGCGC TGGCAAAAAT CTCAACGGAG TCTGAACTTG ACAATGCGGA GGCTTACGCC
CTCCTCATGA GAGGCATTGA GGCCGAGCCC GACAATGCTC TTCTGCTCGC CCATGCCGCG
TGGGCGCTCG AGCATCGGCA CACGATGGGT TGGCCATCGC TTGGTGAGGA CGATGTAGGA
GAGTGTGTGG CGCTGGCGCG GCGCGGGCTC GAACATGCTG CGGGAGATGC GATGGTGATG
GCGCATTGCG GCGTCGCCCT GCTGCAAACC GCAAAGGACT ACGATTGGGC CTTGGCGGTC
CTGCAATCTG CGGCGGAGGC TAATCCAAAC AACCTGATGG TCGTAGTCCG GGCCGGCCTT
GCGCACCTGC ATTGCGGGAG CCTTGACGAG GCCCTGACCC ACTTTCAAAG GGCAAGCCGG
TTGAGCCCGG GGGACCGCGG CGCTCACTTC TCGCTCTGCG GTATTGCAGA CGTGCACTTG
ATCCACGGCA ACTATGCCGA GGCGATTACC TGGGCCGCTC GCGCGCTCGC GAGCAATCCG
AATTTCGATC CGAACCTCTG GGTGCTGATC GCAGCGAATG CCCATCTTGG CCGAATGGAA
GAGGCGGATC GGTATCTGCG TGAGCTAAGG CGACGTGTTC CGGAGGTCAC AATCGCCCGC
ATCAAGGCCG GACAACCTCG CAAGGACCCG ACGAGGACCG CCGCCTTGCT CGAAGGGTTA
CGCAAGGTCG GCCTGAAGGA AGGCTGA
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| Protein sequence | MVEPLYTFGD FVLDPRSGLL RRKGESVEIG SRGLALLQAL LEARGGIVSK AELIERGWPN
TIVEDSNLTV QIASLRKALG PSPDGREWIT TIPRAGYRLV TAYAGASSLT STRPALAVLP
FINLDGGSDQ GYFADGVVNE IITALSRFRS FAVVARNGSF FNNLRFPDVR LVAKELGVGY
MLQGNIRRPG SRLRISVQLV DGSGTHLWAH SFDEELDDVS VFQDRIAESV VSLVEPHIQA
AEIERSRRDR PGSTASYDIY LQALAKISTE SELDNAEAYA LLMRGIEAEP DNALLLAHAA
WALEHRHTMG WPSLGEDDVG ECVALARRGL EHAAGDAMVM AHCGVALLQT AKDYDWALAV
LQSAAEANPN NLMVVVRAGL AHLHCGSLDE ALTHFQRASR LSPGDRGAHF SLCGIADVHL
IHGNYAEAIT WAARALASNP NFDPNLWVLI AANAHLGRME EADRYLRELR RRVPEVTIAR
IKAGQPRKDP TRTAALLEGL RKVGLKEG
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