Gene Smed_5708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5708 
Symbol 
ID5320010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp682565 
End bp682900 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content60% 
IMG OID640777432 
Productcupin 2 domain-containing protein 
Protein accessionYP_001314364 
Protein GI150377769 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.203885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCAG TCCTTCGCCA TCAAGACCCG CAGCCGGGCG AAAGCCGCAC CGTTCGCTTC 
GAAGGGCGGG ACTACGGGAG CCAAGTATCG ATCTTCCTCG TTGATGCTGA TCCCGGTCGA
GGGGTCGCGC TTCATGTGCA TCCCTATTCG GAGACATGGG TCGTGAAGAA GGGAGAAGCC
GAATTCACCG TGGGCGGCGA GAAAACCAGG GCTTTGCCTG GCGATATTAT CGTGGCCGCC
CCCGATGTCC CGCACCGATT CGAAAATGTC GGCGCCGGCA GGCTGGAACT CGTCTGCATC
CACCCCAATG AGACCTTCAT CCAGGAATTC CTCTGA
 
Protein sequence
MLAVLRHQDP QPGESRTVRF EGRDYGSQVS IFLVDADPGR GVALHVHPYS ETWVVKKGEA 
EFTVGGEKTR ALPGDIIVAA PDVPHRFENV GAGRLELVCI HPNETFIQEF L