Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5708 |
Symbol | |
ID | 5320010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 682565 |
End bp | 682900 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777432 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001314364 |
Protein GI | 150377769 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.203885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCAG TCCTTCGCCA TCAAGACCCG CAGCCGGGCG AAAGCCGCAC CGTTCGCTTC GAAGGGCGGG ACTACGGGAG CCAAGTATCG ATCTTCCTCG TTGATGCTGA TCCCGGTCGA GGGGTCGCGC TTCATGTGCA TCCCTATTCG GAGACATGGG TCGTGAAGAA GGGAGAAGCC GAATTCACCG TGGGCGGCGA GAAAACCAGG GCTTTGCCTG GCGATATTAT CGTGGCCGCC CCCGATGTCC CGCACCGATT CGAAAATGTC GGCGCCGGCA GGCTGGAACT CGTCTGCATC CACCCCAATG AGACCTTCAT CCAGGAATTC CTCTGA
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Protein sequence | MLAVLRHQDP QPGESRTVRF EGRDYGSQVS IFLVDADPGR GVALHVHPYS ETWVVKKGEA EFTVGGEKTR ALPGDIIVAA PDVPHRFENV GAGRLELVCI HPNETFIQEF L
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